Return to main results Retrieve Phyre Job Id

Job DescriptionP33931
Confidence97.29%DateThu Jan 5 11:52:54 GMT 2012
Rank110Aligned Residues123
% Identity20%Templatec2cvhB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50.........60.........70.........80.........90.........100.....
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Query Sequence  LNAGEWVQITGSNGAGKTTLLRLLTGLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQPGIKTRLTALENLHFYHRDGD
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Template Sequence  FAPGVLTQVYGPYASGKTTLALQTGLLSGKKVAYVDTEG. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GFS
Template Known Secondary structure  B
TTS
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   17..20.........30.........40.........50..... ...
 
   106...110.........120..... ....130.........140.........150......... 160.........170.
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Query Sequence  TAQCLEALAQAGLAGFEDIP. . . . . . VNQLSAGQQRRVALARLWLTRATLWILDEPFTAI. . . . . . . . DVNGVDRLTQRM
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Template Sequence  PERLVQMAETRGLNPEEALSRFILFTPSDFKEQRRVIGSLKKTVDSNFALVVVDSITAHYRAEENRSGLIAELSRQLQVL
Template Known Secondary structure  TT




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   5960.........70.........80.........90.........100.........110.........120.........130........
 
   172..... ..180......
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Query Sequence  AQHTEQ. GGIVILTTH
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Template Sequence  LWIARKHNIPVIVINQ
Template Known Secondary structure  T


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   139140.........150....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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