Job Description P33931 Confidence 100.00% Date Thu Jan 5 11:52:54 GMT 2012 Rank 46 Aligned Residues 188 % Identity 23% Template c2cbzA_ PDB info PDB header:transport Chain: A: PDB Molecule:multidrug resistance-associated protein 1; PDBTitle: structure of the human multidrug resistance protein 12 nucleotide binding domain 1 Resolution 1.5 Å

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		4	.	.	.	.	.	10	.	.	.			.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure												.	.
Query SS confidence												.	.
Query Sequence		L	E	A	R	E	L	L	C	E	R	.	.	D	E	R	T	L	F	S	G	L	S	F	T	L	N	A	G	E	W	V	Q	I	T	G	S	N	G	A	G	K	T	T	L	L	R	L	L	T	G	L	S	R	P	D	A	G	E	V	L	W	Q	G	Q	P	L	H	Q	V	R	D	S	Y	H	Q	N	L	L	W	I
Query Conservation												.	.
Alig confidence												.	.																																																				.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	V	R	N	A	T	F	T	W	A	R	S	D	P	P	T	L	N	G	I	T	F	S	I	P	E	G	A	L	V	A	V	V	G	Q	V	G	C	G	K	S	S	L	L	S	A	L	L	A	E	M	D	K	V	E	G	H	V	A	I	K	G	.	.	.	.	.	.	.	.	.	.	.	.	S	V	A	Y	V
Template Known Secondary structure											S		T	T	S			S										T	T								S	T	T	S	S									T	T		S											S	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		644	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.													.	.	.	710	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.												.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	H	Q	P	G	I	K	T	R	L	T	A	L	E	N	L	H	F	Y	H	R	D	G	D	T	A	Q	C	L	E	A	L	A	Q	A	G	L	A	G	F	E	D	I	.	.	.	.	.	.	.	.	.	.	.	P	V	N	Q	L	S	A	G	Q	Q	R	R	V	A	L	A	R	L	W	L	T	R	A	T	L	W
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.																.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																.
Template Sequence		P	Q	Q	A	W	I	Q	N	D	.	S	L	R	E	N	I	L	F	G	C	Q	L	E	E	P	.	Y	Y	R	S	V	I	Q	A	C	A	L	L	P	D	L	E	I	L	P	S	G	D	R	T	E	I	G	E	K	G	V	N	L	S	G	G	Q	K	Q	R	V	S	L	A	R	A	V	Y	S	N	A	D	I	Y
Template Known Secondary structure			S	S					S		.								T	T	S				T	T	.									T	T						T	T	S	T	T	G	G	G	S			S	T	T	S	B																					S
Template Predicted Secondary structure											.																.
Template SS confidence
		712	.	.	.	.	.	.	.	720		.	.	.	.	.	.	.	.	.	730	.	.	.	.	.		.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		I	L	D	E	P	F	T	A	I	D	V	N	G	V	D	R	L	T	Q	R	M	A	Q	H	T	E	.	.	Q	G	G	I	V	I	L	T	T	H	Q	P	L	N	V	A	E	S	K	I	R	R	I	S	L	T	Q	T	R	A
Query Conservation																												.	.
Alig confidence																												.	.																.
Template Conservation																																													.
Template Sequence		L	F	D	D	P	L	S	A	V	D	A	H	V	G	K	H	I	F	E	N	V	I	G	P	K	G	M	L	K	N	K	T	R	I	L	V	T	H	S	M	S	Y	L	.	P	Q	V	D	V	I	I	V	M	S	G	G	K	I
Template Known Secondary structure					S	T	T	T	T	S												T	T	S	T	T	S	T	T	T	T	S							S		S	T	T	G	.	G	G	S	S							T	T
Template Predicted Secondary structure																																													.
Template SS confidence
		790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.		.	.	.	.	.	.	.	840	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions