Job Description P33931 Confidence 94.12% Date Thu Jan 5 11:52:54 GMT 2012 Rank 417 Aligned Residues 134 % Identity 13% Template c1wb1C_ PDB info PDB header:protein synthesis Chain: C: PDB Molecule:translation elongation factor selb; PDBTitle: crystal structure of translation elongation factor selb2 from methanococcus maripaludis in complex with gdp Resolution 3.0 Å

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		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	I	T	G	S	N	G	A	G	K	T	T	L	L	R	L	L	T	G	L	S	R	P	D	A	G	E	V	L	W	Q	G	Q	P	L	H	Q	V	R	D	S	Y	H	Q	N	L	L	W	I	G	H	Q	P	G	I	K	T	R	L	T	A	L	E	N	L	H	F	Y	H	R	D	G	D	T	A	Q	C	L	E
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.
Template Sequence		L	G	I	F	G	H	I	D	H	G	K	T	T	L	S	K	V	L	T	E	I	A	S	T	S	A	.	.	.	.	.	.	.	.	.	H	D	K	L	P	E	S	Q	K	R	G	I	T	I	D	I	G	F	S	A	F	K	L	E	N	Y	R	I	T	L	V	D	A	P	G	H	A	D	L	I	R	A	V	V	S
Template Known Secondary structure								T	T	S	S	T	T							T	T	T	S	S		S	S	.	.	.	.	.	.	.	.	.		S	S	S	S	T	T	T	T	S						S	S							T	T									S	S	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.										.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	A	Q	A	G	L	A	G	F	E	D	I	P	V	N	Q	L	S	A	G	Q	Q	R	R	V	A	L	A	R	L	W	L	T	R	A	T	L	W	I	L	D	E	P	F	T	A	I	D	V	N	G	V	D	R	L	T	Q	R	M	A	Q	H	T	E
Query Conservation
Alig confidence																																		.	.
Template Conservation																																		.	.
Template Sequence		A	A	D	I	I	D	L	A	L	I	V	V	D	A	K	E	G	P	K	T	Q	T	G	E	H	M	L	I	L	D	H	F	.	.	N	I	P	I	I	V	V	I	T	K	S	D	N	A	G	T	E	E	I	K	R	T	E	M	I	M	K	S	I	L	Q
Template Known Secondary structure		S		S	S										T	T	T																T	.	.	T											T	T	S
Template Predicted Secondary structure																																		.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110			.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions