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Job DescriptionP33931
Confidence97.49%DateThu Jan 5 11:52:54 GMT 2012
Rank101Aligned Residues151
% Identity15%Templatec1szpC_
PDB info PDB header:dna binding proteinChain: C: PDB Molecule:dna repair protein rad51; PDBTitle: a crystal structure of the rad51 filament
Resolution3.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   26...30.........40.........50 .........60.........70.........80.... .....90........
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Query Sequence  LNAGEWVQITGSNGAGKTTLLRLLT. . . . . . GLSRPDAGEVLWQGQPLHQVRDSYHQNLLWIGHQ. PGIKTRLTALENLH
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Template Sequence  VETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGGGEGKCLYIDTEGTFRPVRLVSIAQRFGLDPDDALNNVAYARAYN
Template Known Secondary structure  SSSSTTSSTTS
TTTT

SSSSS


GGGGT


GGG

S
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   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   99100.........110.........120.........130.........140.........150.........160.... .....170...
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Query Sequence  FYHRDGDTAQCLEALAQAGLAGFEDIPVNQLSAGQQRRVALARLWLTRATLWILDEPFTAIDVNGV. . . . . DRLTQRMAQ
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Template Sequence  ADHQLRLLDAAAQMMSE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . SRFSLIVVDSVMALYRELSARQMHLAKFMRALQR
Template Known Secondary structure  TTT.............................S

TTGGG

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   255....260.........270. ........280.........290.........300.....
 
   174... ..180...... ...190.........200.....
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Query Sequence  HTEQ. GGIVILTTH. QPLNVAESKIRRISLTQTR
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Template Sequence  LADQFGVAVVVTNQVGGNIMAHSSTTRLGFKKGK
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   313......320.........330.........340......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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