Return to main results Retrieve Phyre Job Id

Job DescriptionP06987
Confidence99.88%DateThu Jan 5 10:59:44 GMT 2012
Rank19Aligned Residues139
% Identity17%Templated1u7pa_
SCOP infoHAD-like HAD-like Magnesium-dependent phosphatase-1, Mdp1
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1.. ......10.........20....... ..30.........40.........50.........60.....
Predicted Secondary structure 


..













.............
















Query SS confidence 


. .























. . . . . . . . . . . . .





































Query Sequence  MSQ. . KYLFIDRDGTLISEPPSDFQVDRF. . . . . . . . . . . . . DKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFP
Query Conservation 

 ..
 



 






   

 
   .............
 
 
 


 
 
  

  
 

 




 

  
   
Alig confidence 


..























.............






























.......
Template Conservation      

 








                    
 
     
 
 


   
  

  

   
 

   .......
Template Sequence  MTRLPKLAVFDLDYTLWPFWVDTHVDPPFHKSSDGTVRDRRGQNIQLYPEVPEVLGRLQSLGVPVAAASRTSE. . . . . . .
Template Known Secondary structure 




S

BTTTBSS
TTTT

S

TTS
TT




TTTT



S
.......
Template Predicted Secondary structure 






























.......
Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70...
 
   66...70.........80.........90.........100.........110.........120.........130.........140.....
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  QADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRATDIQLAENMGITG
Query Conservation     
  
   
   
   

 

 


  
   
    


 
 

  

  




 
 





  











Alig confidence  .......





















........










































Template Conservation  .......   
                  ........  

            

   
 
 


   

  
   

  
Template Sequence  . . . . . . . IQGANQLLELFDLGKYFIQREI. . . . . . . . YPGSKVTHFERLHHKTGVPFSQMVFFDDENRNIIDVGRLGVTC
Template Known Secondary structure  .......TT
GGG
S........SSS



GGGS
TTT
Template Predicted Secondary structure  .......





........
















Template SS confidence 















































































   74.....80.........90..... ....100.........110.........120.........130........
 
   146...150.........160..
Predicted Secondary structure 






Query SS confidence 
















Query Sequence  LRYDRETLNWPMIGEQL
Query Conservation 
       

      
Alig confidence 


.












Template Conservation 
 
.  
         
Template Sequence  IHI. RDGMSLQTLTQGL
Template Known Secondary structure 
.SS


Template Predicted Secondary structure  .




Template SS confidence 
















   139140. ........150....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions