Job Description P06987 Confidence 47.56% Date Thu Jan 5 10:59:44 GMT 2012 Rank 174 Aligned Residues 121 % Identity 14% Template d1twia2 SCOP info TIM beta/alpha-barrel PLP-binding barrel Alanine racemase-like, N-terminal domain Resolution 2.00

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		36	.	.	.	40	.	.	.	.	.				.	.	.	.	50			.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure												.	.	.						.	.
Query SS confidence												.	.	.						.	.
Query Sequence		V	I	P	E	L	L	K	L	Q	K	.	.	.	A	G	Y	K	L	.	.	V	M	I	T	N	Q	D	G	L	G	T	Q	S	F	P	Q	A	D	F	D	G	P	H	N	L	M	M	Q	I	F	T	S	Q	G	V	Q	F	D	E	V	L	I	C	P	H	L	P	A	D	E	C	D	C	R	K	P	K	V	K	L
Query Conservation												.	.	.						.	.
Alig confidence												.	.	.						.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	I	E	A	F	K	R	W	E	E	E	T	G	K	E	F	I	V	A	Y	A	Y	K	A	N	A	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	A	I	T	R	L	L	A	K	L	G	C	G	A	D	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	G	E
Template Known Secondary structure														S									G	G	G				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.																	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.																	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130			.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		V	E	R	Y	L	A	E	Q	A	M	D	R	A	N	S	Y	V	I	G	D	.	.	R	A	T	D	I	Q	L	A	E	N	M	G	I	T	G	L	R	Y	D	R	E	T	L	N	W	P	M	I	G	E	Q	L	T	R	R	D	R	Y	A	H	V	V	R	N	T	K	E	T	Q	I	D	V	Q	V	W	L	D	R
Query Conservation																						.	.
Alig confidence							.															.	.																							.																				.	.	.	.	.	.	.
Template Conservation							.																																							.																				.	.	.	.	.	.	.
Template Sequence		L	Y	I	A	K	.	L	S	N	V	P	S	K	K	I	V	F	N	G	N	C	K	T	K	E	E	I	I	M	G	I	E	A	N	I	R	A	F	N	V	D	S	I	S	.	E	L	I	L	I	N	E	T	A	K	E	L	G	E	T	A	N	V	A	.	.	.	.	.	.	.	F	R	I	N	P	N	V	N	P
Template Known Secondary structure							.		T	T			G	G	G						S	S												T	T		S						S			.													T							.	.	.	.	.	.	.									T
Template Predicted Secondary structure							.																																							.																				.	.	.	.	.	.	.
Template SS confidence
		109	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170								.	.	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	S	K	I	N	T	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	T	H	P	K	I	S	T	G
Template Known Secondary structure		T	T
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions