Job Description P06987 Confidence 98.86% Date Thu Jan 5 10:59:44 GMT 2012 Rank 114 Aligned Residues 126 % Identity 14% Template d1q92a_ SCOP info HAD-like HAD-like 5'(3')-deoxyribonucleotidase (dNT-2) Resolution 1.40

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.																																												20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	Q	K	Y	L	F	I	D	R	D	G	T	L	I	S	E	P	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	F	Q	V	D	R	F	D	K	L	A	F	E	P	G	V	I	P
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	A	L	R	V	L	V	D	M	D	G	V	L	A	D	F	E	G	G	F	L	R	K	F	R	A	R	F	P	D	Q	P	F	I	A	L	E	D	R	R	G	F	W	V	S	E	Q	Y	G	R	L	R	P	G	L	S	E	K	A	I	S	I	W	E	S	K	N	F	F	F	E	L	E	P	L	P	G	A	V	E
Template Known Secondary structure										S	B	T	T	T	B															T	T	S					G	G	G			S	S										S	T	T										T	S	T	T	T	T	T	T			B		T	T
Template Predicted Secondary structure
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
		39	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		E	L	L	K	L	Q	K	.	A	G	Y	K	L	V	M	I	T	N	Q	D	G	L	G	T	Q	S	F	P	Q	A	D	F	D	G	P	H	N	L	M	M	Q	I	F	T	S	Q	G	V	Q	F	D	E	V	L	I	C	P	H	L	P	A	D	E	C	D	C	R	K	P	K	V	K	L	V	E	R	Y	L	A	E
Query Conservation									.
Alig confidence									.													.	.	.	.	.																						.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.																						.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template Sequence		A	V	K	E	M	A	S	L	Q	N	T	D	V	F	I	C	T	S	P	I	.	.	.	.	.	K	M	F	K	Y	C	P	Y	E	K	Y	A	W	V	E	K	Y	F	G	P	D	.	.	.	.	.	.	.	F	L	E	Q	I	V	L	T	R	D	K	T	V	V	S	A	D	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S	T	T											.	.	.	.	.	S			S	S															G	G	.	.	.	.	.	.	.	G	G	G	G					S		S	T	T	S			S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.	.	.	.																						.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.								.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.		150	.	.	.	.	.	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		Q	A	M	D	R	A	N	S	Y	V	I	G	D	R	A	T	D	I	Q	L	A	E	N	M	G	I	T	G	L	R	Y	D	.	R	E	T	L	N	W	P	M
Query Conservation																																		.
Alig confidence		.	.	.	.	.	.	.	.																									.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	L	I	D	D	R	P	D	I	T	G	A	E	P	T	P	S	W	E	H	V	L	F	T	A	C	H	N	Q	H	L	Q	L
Template Known Secondary structure		.	.	.	.	.	.	.	.					S		S					S		S	S		S	S								T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions