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Job DescriptionP06987
Confidence98.55%DateThu Jan 5 10:59:44 GMT 2012
Rank131Aligned Residues110
% Identity29%Templated1nf2a_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MSQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIF
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Template Sequence  MYR. VFVFDLDGTLLNDNLE. . . . . . . . . . . ISEKDRRNIEKLSR. KCYVVFASGRM. . . . . . . . . . . . . . . LVSTLNVE
Template Known Secondary structure 
B
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S
TTS
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TT.TS
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   1.. ......10......... 20.........30... ......40.... .....50..
 
   81........90.
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Query Sequence  TSQGVQFDEVL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRV
Template Known Secondary structure  SSS


GGGTTTT

B
GGG



SS
SS

TT

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   53......60.........70.........80.........90.........100.........110.........120.........130..
 
   92.......100.........110.........120...
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ICPHLPADECDCRKPKVKLVERYLAEQAMDRA
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Template Sequence  EPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFKSFPTYLEIVPKNVD. . . K. . GKALRFLRERMNWKKE
Template Known Secondary structure 
TT
BS

TTTSTT
TT

.....T

GG
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   133......140.........150.........160.........170.........180.........190 . ........200.......
 
   124.....130.........140...
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Query Sequence  NSYVIGDRATDIQLAENMGI
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Template Sequence  EIVVFGDNENDLFMFEEAGL
Template Known Secondary structure  G
STT
S
Template Predicted Secondary structure 






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   208.210.........220.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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