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Job DescriptionP06987
Confidence98.75%DateThu Jan 5 10:59:44 GMT 2012
Rank121Aligned Residues128
% Identity23%Templatec3fzqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:putative hydrolase; PDBTitle: crystal structure of putative haloacid dehalogenase-like hydrolase2 (yp_001086940.1) from clostridium difficile 630 at 2.10 a resolution
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60....
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Query Sequence  QKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPELLKLQKAGYKLVMITNQDGLGTQSF. . . . . . . . . . . . . . . . . .
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Template Sequence  YKLLILDIDGTLRDEV. . . . . . . . . . . YGIPESAKHAIRLCQKNHCSVVICTGRSXGTIQDDVLSLGVDGYIAGGGNYIQ
Template Known Secondary structure 


SBTTTBBTT...........TB

TT

SS
TTTS
TT

STTTT
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   4.....10......... 20.........30.........40.........50.........60.........70..
 
  
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Conservation                                                                                  
Template Sequence  YHGELLYNQSFNQRLIKEVVCLLKKREVAFSIESQEKVFXNQKAKEIFETXNQLKGTNSCINKQHIQEKITYENNIEEYK
Template Known Secondary structure  TT



T

SS

TTTS

TT

SSS




GGG
S
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   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   65....70.........80.........90.........100.........110.........120.........130...
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Query Sequence  . . . . . . . . . . . PQADFDGPHNLMMQIFTSQGVQFDEVLICPHLPADECDCRKPKVKLVERYLAEQAMDRANSYVIGDRAT
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Template Sequence  SQDIHKICLWSNEKVFDEVKDILQDKXELAQRDISSQYYEIIQKD. . . . . . FHKGKAIKRLQERLGVTQKETICFGDGQN
Template Known Secondary structure  S





GGGGGGTTT......
ST

STT

SGG
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   153......160.........170.........180.........190....... ..200.........210.........220......
 
   134.....140.......
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Query Sequence  DIQLAENMGITGLR
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Template Sequence  DIVXFQASDVTIAX
Template Known Secondary structure  GT
S
Template Predicted Secondary structure 


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   227..230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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