Job Description P06987 Confidence 99.25% Date Thu Jan 5 10:59:44 GMT 2012 Rank 97 Aligned Residues 116 % Identity 17% Template c3e8mD_ PDB info PDB header:transferase Chain: D: PDB Molecule:acylneuraminate cytidylyltransferase; PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily Resolution 1.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	K	Y	L	F	I	D	R	D	G	T	L	I	S	E	P	P	S	D	F	Q	V	D	R	F	D	K	L	A	F	E	P	G	V	I	P	E	L	L	K	L	Q	K	A	G	Y	K	L	V	M	I	T	N	Q	D	G	L	G	T	Q	S	F	P	Q	A	D	F	D	G	P	H	N	L	M	M	Q	I	F	T
Query Conservation
Alig confidence																					.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	K	L	I	L	T	D	I	D	G	V	W	T	D	G	G	M	F	.	Y	D	Q	T	G	N	E	W	K	K	F	N	T	S	D	S	A	G	I	F	W	A	H	N	K	G	I	P	V	G	I	L	T	G	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	I	V	R	R	R	A	E
Template Known Secondary structure				S						S	T	T	T	T	S	S	S				.			S	S	S								G	G	G										T	T								S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																					.																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.		.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																.	.	60	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	G	V	Q	F	D	E	V	L	I	C	P	H	L	P	A	D	E	C	D	C	R	K	P	K	V	K	L	V	E	R	Y	L	A	E	Q	A	M	D	R	A	N	S	Y	V	I	G	D	R	A	T	D	I	Q	L	A	E	N	M	G	I	T	G
Query Conservation
Alig confidence						.	.								.	.	.	.	.	.	.	.	.	.
Template Conservation						.	.								.	.	.	.	.	.	.	.	.	.
Template Sequence		K	L	K	V	.	.	D	Y	L	F	Q	G	V	.	.	.	.	.	.	.	.	.	.	V	D	K	L	S	A	A	E	E	L	C	N	E	L	G	I	N	L	E	Q	V	A	Y	I	G	D	D	L	N	D	A	K	L	L	K	R	V	G	I	A	G
Template Known Secondary structure			T	T		.	.	S					S		.	.	.	.	.	.	.	.	.	.	S														T			G	G	G							S	G	G	G					T	T	S	S
Template Predicted Secondary structure						.	.								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70			.	.	.	.	.	.	.											.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions