Job Description P06987 Confidence 85.14% Date Thu Jan 5 10:59:44 GMT 2012 Rank 163 Aligned Residues 104 % Identity 15% Template c2zxeA_ PDB info PDB header:hydrolase/transport protein Chain: A: PDB Molecule:na, k-atpase alpha subunit; PDBTitle: crystal structure of the sodium - potassium pump in the e2.2k+.pi2 state Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	E	P	G	V	I	P	E	L	L	K	L	Q	K	A	G	Y	K	L	V	M	I	T	N	Q	D	G	L	G	T	Q	S	F	P	Q	A	D	F	D	G	P	H	N	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.
Template Sequence		P	P	R	A	A	V	P	D	A	V	G	K	C	R	S	A	G	I	K	V	I	M	V	T	G	D	H	.	.	.	.	.	.	.	.	P	I	T	A	K	A	I	A	K	G	V	G	I	I	S	E	G	N	E	T	I	E	D	I	A	A	R	L	N	I	P	I	G	Q	V	N	P	R	D	A	K	A	C	V	V
Template Known Secondary structure			B		T	T											T	T								S	S		.	.	.	.	.	.	.	.												T	S	S		T	T											T	T			G	G	G	S		G	G	G
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.
Template SS confidence
		594	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620									.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
											77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	M	Q	I	F	T	S	Q	G	V	Q	F	D	E	V	L	I	C	P	H	L	P	A	D	E	C	D	C	R	K	P	K	V	K	L	V	E	R	Y	L	A	E	Q	A	M	D	R	A	N	S	Y	V	I	G	D	R	A	T	D	I	Q	L	A	E	N	M	G	I	T	G	L	R
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.																																								.
Template Sequence		H	G	S	D	L	K	D	L	S	T	E	V	L	D	D	I	L	H	Y	H	T	E	I	V	F	A	.	.	.	.	.	.	.	.	.	.	.	R	T	S	P	Q	Q	K	L	I	I	V	E	G	C	Q	R	Q	G	A	I	V	A	V	T	G	D	G	V	N	D	S	P	A	L	K	K	A	D	I	.	G	V	A
Template Known Secondary structure							T	T														S						.	.	.	.	.	.	.	.	.	.	.	S																T	T									S	G	G	G							S	S		.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.																																								.
Template SS confidence
		666	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.												.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730		.	.	.
		148	.	150	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	R	E	T	L	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	I	S	G	S	D
Template Known Secondary structure			S	S	S
Template Predicted Secondary structure
Template SS confidence
		734	.	.	.	.	.	740

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions