|   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | K | Y | L | F | I | D | R | D | G | T | L | I | S | E | P | P | S | D | F | Q | V | D | R | F | D | K | L | A | F | E | P | G | V | I | P | E | L | L | K | L | Q | K | A | G | Y | K | L | V | M | I | T | N | Q | D | G | L | G | T | Q | S | F | P | Q | A | D | F | D | G | P | H | N | L | M | M | Q | I | F | T | S |
Query Conservation |   |
  |
|   |
|
|
|
|   |
|
|
|
|
|
|
|   |   |   |
|
|   |
|   |   |   |
|   |
|   |
|   |
|
|
|   |
|   |
|   |   |
|
|   |   |
|   |
|
|   |
|
|
|
|
|   |
|
|   |   |
|   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |
|   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |
|   |   |
|   |
|   |
|
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
X | R | G | L | I | V | D | Y | A | G | V | L | D | G | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | D | Q | R | R | W | R | N | L | L | A | A | A | K | K | N | G | V | G | T | V | I | L | S | N | D | P | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | G | L | G | A | A | P | I | R | E |
Template Known Secondary structure |   |
|
|  |  |  |  |
| S | T | T | T | T | S | S |
| . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
| S |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
| G | G | G | G |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 50 | . | . | . |
  |
  |   |
83 | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | G | V | Q | F | D | E | V | L | I | C | P | H | L | P | A | D | E | C | D | C | R | K | P | K | V | K | L | V | E | R | Y | L | A | E | Q | A | M | D | R | A | N | S | Y | V | I | G | D | R | A | T | D | I | Q | L | A | E | N | M | G | I | T | G | L | R | Y | D | R | E | T | L | N | W | P | M | I | G | E | Q | L |
Query Conservation |   |
  |
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |   |   |
|
|
|   |
|   |
|
|   |   |
|
|   |   |
|
|
|
|
|   |
|   |
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |
|
Alig confidence |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
| . | . | . |   |   |   |
|
|   |
|   |   |
|   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
Template Sequence |   |
L | E | T | . |
. |
. |
N | G | V | V | D | K | V | L | L | S | G | E | L | G | V | E | K | P | E | E | A | A | F | Q | A | A | A | D | A | I | D | L | P | X | R | D | C | V | L | V | D | D | S | I | L | N | V | R | G | A | V | E | A | G | L | V | G | V | Y | Y | Q | Q | F | D | R | A | V | V | E | I | V | G | L | F |
Template Known Secondary structure |   |
 |  |  | . | . | . | T | T | S | S | S |  |  |  |  |  |  |  |  | S |
|
| T | T | S |  |  |  |  |  |  |  |  |  |  | T | T |
|
| G | G | G |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
54 | . | . | |
|
|
. | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
  |
  |   |
163 | . | . |
Predicted Secondary structure |   |
|
|
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
T | R | R |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
|   |   |
Template Sequence |   |
G | L | E |
Template Known Secondary structure |   |
T |
|
|
Template Predicted Secondary structure |   |
|
|
|
Template SS confidence |   |
|
|
|
  |   |
131 | . | . |
  |