Job Description P06987 Confidence 99.84% Date Thu Jan 5 10:59:44 GMT 2012 Rank 27 Aligned Residues 140 % Identity 14% Template c2odaB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:hypothetical protein pspto_2114; PDBTitle: crystal structure of pspto_2114 Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		K	Y	L	F	I	D	R	D	G	T	L	I	S	E	P	P	S	D	F	.	.	Q	V	D	R	F	D	K	L	A	F	E	P	G	V	I	P	E	L	L	K	L	Q	K	A	G	Y	K	L	V	M	I	T	N	Q	D	G	L	G	T	Q	S	F	P	Q	A	D	F	D	G	P	H	N	L	M	M	Q	I	F	T
Query Conservation																					.	.
Alig confidence																					.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	A	L	L	F	G	L	S	G	C	L	V	D	F	G	A	Q	A	A	T	S	D	T	P	D	D	E	H	A	Q	L	T	P	G	A	Q	N	A	L	K	A	L	R	D	Q	G	X	P	C	A	W	I	D	E	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	L	S	T	P	L	A
Template Known Secondary structure		S						T	B	T	T	T	B		T	T		G	G	G	G		S	S			G	G	G	G	S	B		T	T												T									S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.																	.	.	.	.	.	.	.	70
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		S	Q	G	V	Q	F	D	E	V	L	I	C	P	H	L	P	A	D	E	C	D	C	R	K	P	K	V	K	L	V	E	R	Y	L	A	E	Q	A	M	D	R	.	A	N	S	Y	V	I	G	D	R	A	T	D	I	Q	L	A	E	N	M	G	I	T	G	L	R	Y	D	R	E	T	L	N	W	P	M	I	G	E
Query Conservation																																											.
Alig confidence				.	.	.	.	.	.	.																																	.
Template Conservation				.	.	.	.	.	.	.
Template Sequence		A	P	.	.	.	.	.	.	.	V	N	D	W	X	I	A	A	P	R	P	T	A	G	W	P	Q	P	D	A	C	W	X	A	L	X	A	L	N	V	S	Q	L	E	G	C	V	L	I	S	G	D	P	R	L	L	Q	S	G	L	N	A	G	L	W	T	I	G	L	A	S	C	G	P	L	C	G	L	S	P	S
Template Known Secondary structure		T	T	.	.	.	.	.	.	.	T	T	T	T								S	S		T	T	S	T										T	T		S		S	T	T						S											T	T							S	S	S	S	T	T	T
Template Predicted Secondary structure				.	.	.	.	.	.	.
Template SS confidence
		71	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		161	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	L	T	R	R	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	W	Q	A	L	N
Template Known Secondary structure						S
Template Predicted Secondary structure
Template SS confidence
		144	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions