 |
Job Description | P06987 | Confidence | 58.21% | Date | Thu Jan 5 10:59:44 GMT 2012 |
Rank | 170 | Aligned Residues | 42 |
% Identity | 19% | Template | c2ja9A_ |
PDB info |
PDB header:rna-binding protein | Chain: A: PDB Molecule:exosome complex exonuclease rrp40; |
PDBTitle: structure of the n-terminal deletion of yeast exosome2 component rrp40
|
Resolution | 2.20 Å |
|
  |   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | M | L | D | Q | I | A | T | H | G | G | F | R | M | E | I | N | V | K | G | D | L | Y | I | D | D | H | H | T | V | E | D | T | G | L | A | L | G | E | A | L | K | I | A |
Query Conservation |   |
|
|
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |
|
|   |   |   |
|   |
|
|   |   |
|
|   |   |
|   |
|
|   |
|   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |
|   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |
|
|
|   |   |   | . | . |   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |
Template Sequence |   |
P | L | L | K | V | L | A | A | H | T | K | F | E | V | A | I | G | L | N | G | K | I | W | V | K | C | E | . |
. |
E | L | S | N | T | L | A | C | Y | R | T | I | M | E | C |
Template Known Secondary structure |   |
|  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  | T | T | T |  |  |  |  |  |
| S | . | . | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
173 | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|