Job Description P06987 Confidence 99.51% Date Thu Jan 5 10:59:44 GMT 2012 Rank 89 Aligned Residues 144 % Identity 20% Template c1zjjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein ph1952; PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3 Resolution 1.85 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	Y	L	F	I	D	R	D	G	T	L	I	S	E	P	P	S	D	F	Q	V	D	R	F	D	K	L	A	F	E	P	G	V	I	P	E	L	L	K	L	Q	K	A	G	Y	K	L	V	M	I	T	N	Q	D	G	L	G	T	Q	S	F	P	Q	A	D	F	D	G	P	H	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	V	A	I	I	F	D	M	D	G	V	L	Y	R	G	.	.	.	.	.	.	.	.	.	.	.	.	N	R	A	I	P	G	V	R	E	L	I	E	F	L	K	E	R	G	I	P	F	A	F	L	T	N	N	S	T	K	T	P	E	M	Y	R	E	K	L	L	K	M	G	I	D	V	S	S	S	I	I	I	T
Template Known Secondary structure										B	T	T	T			T	.	.	.	.	.	.	.	.	.	.	.	.	T				T	T												T								S			S	S											T	T	T					G	G	G
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.													.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
																									74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	M	M	Q	I	F	T	S	Q	G	V	Q	F	D	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	G	L	A	T	R	L	Y	M	S	K	H	L	D	P	G	K	I	F	V	I	G	G	E	G	L	V	K	E	M	Q	A	L	G	W	G	I	V	T	L	D	E	A	R	Q	G	S	W	K	E	V	K	H	V	V	V	G	L	D	P	D	L	T	Y	E	K	L	K	Y	A	T	L	A	I	R	N	G	A	T	F
Template Known Secondary structure														S									S												T	S		B								T	T	G	G	G	G										T	T															T	T
Template Predicted Secondary structure
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
																										91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.		.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	I	C	P	H	L	P	A	D	E	C	D	C	R	K	P	K	V	K	L	V	E	R	Y	L	A	E	Q	A	M	D	R	A	N	S	Y	V	I	G	D	R	.	A	T	D	I	Q	L	A	E	N	M	G	I	T	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																										.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.													.
Template Conservation																																																					.	.
Template Sequence		I	G	T	N	P	D	A	T	L	P	G	E	E	G	I	Y	P	G	A	G	S	I	I	A	A	L	K	V	A	T	N	V	E	P	I	I	I	G	K	P	N	E	P	M	Y	E	V	V	R	E	M	.	.	F	P	G	E	E	L	W	M	V	G	D	R	L	D	T	D	I	A	F	A	K	K	F	G	M	K	A
Template Known Secondary structure				S				S					T	T																									S	T	T	S											.	.	S	T	T								S		T	T	T								T	T
Template Predicted Secondary structure																																																					.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	Y	D	R	E	T	L	N	W	P	M	I	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	M	V	L	T	G	V	S	S	L	E	D	I	K	K
Template Known Secondary structure					S	S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions