Return to main results Retrieve Phyre Job Id

Job DescriptionP41039
Confidence99.72%DateThu Jan 5 12:01:20 GMT 2012
Rank3Aligned Residues50
% Identity28%Templatec2kq9A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:dnak suppressor protein; PDBTitle: solution structure of dnak suppressor protein from2 agrobacterium tumefaciens c58. northeast structural3 genomics consortium target att12/ontario center for4 structural proteomics target atc0888
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60......
Predicted Secondary structure 


















Query SS confidence 


















































Query Sequence  NSTIEDAIARARGEIPRGESLDECEECGAPIPQARREAIPGVRLCIHCQQE
Query Conservation 
  
   
  

 

  
 


 
  

  

  

 
 
 
  

 

  
Alig confidence 

















.































Template Conservation      
  
  

 

  
. 

 
  


 
   

 
 
 
  

 

  
Template Sequence  GQDELRAIDAALARIASG. TFGTCVKCGKRISEDRLKAVPYTPFCQECAAA
Template Known Secondary structure  T.

STTTT


S

SS
Template Predicted Secondary structure 

.












Template SS confidence 


















































   62.......70......... 80.........90.........100.........110.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions