Job Description P41039 Confidence 14.11% Date Thu Jan 5 12:01:20 GMT 2012 Rank 36 Aligned Residues 55 % Identity 25% Template c1nnjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:formamidopyrimidine-dna glycosylase; PDBTitle: crystal structure complex between the lactococcus lactis fpg and an2 abasic site containing dna Resolution 1.90 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.										.	.	.					.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.				.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.				.	.	.	.
Query Sequence		D	A	V	N	E	Q	I	N	S	T	I	E	D	A	I	A	R	A	R	G	E	I	P	R	G	E	S	.	.	.	.	.	.	.	.	.	L	D	E	.	.	.	.	C	E	E	C	G	A	P	I	P	Q	A	R	R	E	A	I	P	G	V	R	L	C	I	H	C	Q
Query Conservation																													.	.	.	.	.	.	.	.	.				.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.				.	.	.	.																				.
Template Conservation																																																																.
Template Sequence		H	L	L	H	D	S	I	I	E	I	L	Q	K	A	I	K	L	G	G	S	S	I	A	L	G	S	T	G	K	M	Q	N	E	L	Q	V	Y	G	K	T	G	E	K	C	S	R	C	G	A	E	I	Q	K	I	K	V	A	G	R	G	T	H	.	F	C	P	V	C	Q
Template Known Secondary structure																		T	T						T	T	T	T			G	G	G	S		S	S	T	T		T	T	S	B		T	T	T			B							T	T					.			T	T	T	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions