Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFL3
Confidence100.00%DateThu Jan 5 11:26:39 GMT 2012
Rank7Aligned Residues151
% Identity30%Templated2fu0a1
SCOP infoCyclophilin-like Cyclophilin-like Cyclophilin (peptidylprolyl isomerase)
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90 .........100......
Predicted Secondary structure 






























..















Query SS confidence 





























































. .















Query Sequence  PHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQ. . KKPNPPIKNEADNGLR
Query Conservation    
 
 
  
 
 


  
 

 

 

  
   
 
 
  
 

     

 
        ..         
      
Alig confidence 





























































..















Template Conservation    
   

 
 
 
 
    

    

  
     
    
 

     

 
                          
Template Sequence  KSAIIYTTMGDIHISLFYKECKKTVQNFSVHSINGYYNNCIFHRVIKHFMVQTGDPSGDGTGGESIWGNEFEDEFFDHLN
Template Known Secondary structure 
TT
TTT
TTTTTT
B

TTT

TTSSSS



TTSS
B



BTTB
Template Predicted Secondary structure 













































Template SS confidence 















































































   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   107..110.........120.........130.........140.........150.........160.........170.........180......
Predicted Secondary structure 













































Query SS confidence 















































































Query Sequence  NTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKPVVILSA
Query Conservation       
            


 
 
     

        



 



 


 

              
   
 
   
Alig confidence 































.....



























....










Template Conservation      
  
          




 
     

.....    


 
  
 


  
        
.... 
   
 
   
Template Sequence  HSKPFMVSMANCGPNTNGSQFFITTVPCPWLD. . . . . FKHTVFGKVTQGSKIVLDIEKVRTDKRD. . . . KPLEDIKILNI
Template Known Secondary structure  SSSSS

SSTT
B
S
SS

GGGT.....TTS

TS
B
TTS....
BSS

B
Template Predicted Secondary structure 



















.....











....




Template SS confidence 















































































   86...90.........100.........110....... ..120.........130.........140..... ....150......
 
   187.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  KV
Query Conservation   
Alig confidence 

Template Conservation   
Template Sequence  KI
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 

   157.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions