Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFL3
Confidence100.00%DateThu Jan 5 11:26:39 GMT 2012
Rank12Aligned Residues156
% Identity31%Templated2b71a1
SCOP infoCyclophilin-like Cyclophilin-like Cyclophilin (peptidylprolyl isomerase)
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40.........50.........60.........70.........80.........90 .........100
Predicted Secondary structure 




































..









Query SS confidence 



































































. .









Query Sequence  MAAKGDPHVLLTTSAGNIELELDKQKAPVSVQNFVDYVNSGFYNNTTFHRVIPGFMIQGGGFTEQMQQ. . KKPNPPIKNE
Query Conservation          
 
 
  
 
 


  
 

 

 

  
   
 
 
  
 

     

 
        ..         
Alig confidence 



































































..









Template Conservation          
 
 
  
 
 
 
  
 

    

  
     
    
 

     

 
                    
Template Sequence  KGHTERGYITIYTNLGDFEVELYWYHSPKTCLNFYTLCEMGFYDNTIFHRVIPNFVIQGGDPTGTGKGGKSIYGEYFEDE
Template Known Secondary structure  S
TT
TTTSTTTTTTTTTTTSSSS


BTTBS
B


Template Predicted Secondary structure 












































Template SS confidence 















































































   33......40.........50.........60.........70.........80.........90.........100.........110..
 
   101........110.........120.........130.........140.........150.........160.........170.........180
Predicted Secondary structure 



















































Query SS confidence 















































































Query Sequence  ADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVPTHDVGPYQNVPSKP
Query Conservation             
            


 
 
     

        



 



 


 

              
   
Alig confidence 





































.....



























....




Template Conservation            
          
  




 
     

.....   



 
  
 


  
         .... 
   
Template Sequence  INKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLD. . . . . GKHTIFARVSKNMTCIENIASVQTTATN. . . . KPIFD
Template Known Secondary structure 

TT



STT

SSTT
BSS
SS

GGGT.....TTS

TS
B
TT
....
BSS
Template Predicted Secondary structure 
























.....












....




Template SS confidence 















































































   113......120.........130.........140.........150 .........160.........170........ .180...
 
   181......
Predicted Secondary structure 
Query SS confidence 






Query Sequence  VVILSAK
Query Conservation 
 
    
Alig confidence 






Template Conservation 
 
   
Template Sequence  LKILRTS
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 






   184.....190
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions