Job Description P0AFL3 Confidence 78.81% Date Thu Jan 5 11:26:39 GMT 2012 Rank 43 Aligned Residues 117 % Identity 17% Template d1zx8a1 SCOP info Cyclophilin-like Cyclophilin-like TM1367-like Resolution 1.90

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		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		P	H	V	L	L	T	T	S	A	G	N	I	E	L	E	L	D	K	Q	K	A	P	V	S	V	Q	N	F	V	D	Y	V	.	.	.	.	N	S	G	F	Y	N	N	T	T	F	H	R	V	I	P	G	F	M	I	Q	G	G	G	F	T	E	Q	M	Q	Q	K	K	P	N	P	P	I	K	N	E	A	D	N	G
Query Conservation																																		.	.	.	.
Alig confidence																					.	.												.	.	.	.						.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.																					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	R	V	E	L	L	F	E	S	G	K	C	V	I	D	L	N	E	E	.	.	Y	E	V	V	K	L	L	K	E	K	I	P	F	E	S	V	V	N	T	W	.	G	E	E	I	Y	F	S	T	P	V	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Q	K	X	E	N	P	R
Template Known Secondary structure									S	S									T	T	.	.	S											S								S	.	S	S							S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S	S
Template Predicted Secondary structure																					.	.																					.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.			20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50																				.	.	.	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		L	R	N	T	R	G	T	I	A	M	A	R	T	A	D	K	D	S	A	T	S	Q	F	F	I	N	V	A	D	N	A	F	L	D	H	G	.	Q	R	D	F	G	Y	A	V	F	G	K	V	V	K	G	M	D	V	A	D	K	I	S	Q	V	P	T	H	D	V	G	P	Y	Q	N	V	P	S	K	P	V	V	I
Query Conservation																																						.
Alig confidence																		.	.	.	.	.	.															.																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	V	V	E	I	G	D	V	G	Y	W	P	P	G	K	A	.	.	.	.	.	.	L	C	L	F	F	G	K	T	P	X	S	D	D	K	I	Q	P	A	S	A	V	N	V	I	G	K	I	V	E	G	L	E	D	L	K	K	I	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	G	E	K	V	A	V
Template Known Secondary structure		S	S	B		T	T						G	G	G	T		.	.	.	.	.	.					S	S			T	T		S	S	S	B			S	S												G	G	G	G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.							.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.														.	.	.	.	.	.	.	.
		184	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	F	A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		120	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions