 |
Job Description | P0AFL3 | Confidence | 1.71% | Date | Thu Jan 5 11:26:39 GMT 2012 |
Rank | 87 | Aligned Residues | 72 |
% Identity | 13% | Template | d1vi7a1 |
SCOP info | Ribosomal protein S5 domain 2-like
| Ribosomal protein S5 domain 2-like
| YigZ N-terminal domain-like
|
Resolution | 2.80 |
|
 |
  |   |
26 | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
. | . | . | |
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  | . | . | . |  |  |  | . |  |
|
|
|  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | G | D | P | H | V | L | L | T | T | S | A | G | N | I | E | L | E | L | D | K | Q | K | A | P | V | S | V | Q | N | F | V | D | Y | V | N | S | G | F | Y | N | N | T | T | F | . |
. |
. |
H | R | V | . |
I | P | G | F | M | I | Q | G | G | G | F | T | E | Q | M | Q | Q | K | K | P | N | P | P | I |
Query Conservation |   |
  |   |   |   |   |
|   |
|   |
|   |   |
|   |
|   |
|
|
|   |   |
|   |
|
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |
|   |
|   |   |
| . | . | . |   |
|
| . |   |   |   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|   |   |
|
|
|
|
|
|
|
|   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |   |   |   |
|
|
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|
|
|
|   |
|
|
Template Sequence |   |
A | A | P | V | T | V | V | E | E | I | K | K | S | R | F | I | T | M | L | A | H | T | D | G | V | E | A | A | K | A | F | V | E | S | V | R | A | E | H | P | D | A | R | H | H | C | V | A | W | V | A | G | A | P | D | D | S | Q | Q | L | G | F | S | D | D | G | E | P | A | G | T | A | G | K | P | M |
Template Known Secondary structure |   |
S | S |
|  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| T | T |
| S | B |
|
|  |  |  |  |
|
| S |
| S | S | S |
|
|
|  |  |  |
| T | T | S |
| T | T | S | S | S |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|