Job Description P0AFL3 Confidence 100.00% Date Thu Jan 5 11:26:39 GMT 2012 Rank 15 Aligned Residues 162 % Identity 30% Template d1ihga2 SCOP info Cyclophilin-like Cyclophilin-like Cyclophilin (peptidylprolyl isomerase) Resolution 1.80

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		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60												.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																					.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	S	P	A	A	M	A	A	K	G	D	P	H	V	L	L	T	T	S	.	.	.	.	.	A	G	N	I	E	L	E	L	D	K	Q	K	A	P	V	S	V	Q	N	F	V	D	Y	V	.	.	.	.	.	.	.	.	.	.	.	N	S	G	F	Y	N	N	T	T	F	H	R	V	I	P	G	F	M	I	Q	G
Query Conservation																					.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	Q	A	K	P	S	N	P	S	N	P	R	V	F	F	D	V	D	I	G	G	E	R	V	G	R	I	V	L	E	L	F	A	D	I	V	P	K	T	A	E	N	F	R	A	L	C	T	G	E	K	G	I	G	P	T	T	G	K	P	L	H	F	K	G	C	P	F	H	R	I	I	K	K	F	M	I	Q	G
Template Known Secondary structure					S	S	S	S		T	T	S										T	T												T	T	T															T	T		B		T	T	T	S	S	B	S			T	T		B						T	T	T
Template Predicted Secondary structure
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		82	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.
Query SS confidence											.	.	.
Query Sequence		G	G	F	T	E	Q	M	Q	Q	.	.	.	K	K	P	N	P	P	I	K	N	E	A	D	N	G	L	R	N	T	R	G	T	I	A	M	A	R	T	A	D	K	D	S	A	T	S	Q	F	F	I	N	V	A	D	N	A	F	L	D	H	G	Q	R	D	F	G	Y	A	V	F	G	K	V	V	K	G	M	D	V
Query Conservation											.	.	.
Alig confidence											.	.	.															.																																		.	.	.	.	.
Template Conservation																												.																																		.	.	.	.	.
Template Sequence		G	D	F	S	N	Q	N	G	T	G	G	E	S	I	Y	G	E	K	F	E	D	E	N	F	H	Y	.	K	H	D	K	E	G	L	L	S	M	A	N	A	G	S	N	T	N	G	S	Q	F	F	I	T	T	V	P	T	P	H	L	D	.	.	.	.	.	G	K	H	V	V	F	G	Q	V	I	K	G	M	G	V
Template Known Secondary structure				T	T	T	S	S	S	S				B	T	T	B	S		B							B	.				S	T	T							S	S	T	T		B		S						S	S			G	G	G	T	.	.	.	.	.	T	T	S
Template Predicted Secondary structure																												.																																		.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.						.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	K	I	S	Q	V	P	T	H	D	V	G	P	Y	Q	N	V	P	S	K	P	V	V	I	L	S	A	K	V	L	P
Query Conservation
Alig confidence												.	.	.	.	.
Template Conservation												.	.	.	.	.
Template Sequence		A	K	I	L	E	N	V	E	V	K	.	.	.	.	.	G	E	K	P	A	K	L	C	V	I	A	E	C	G	E	L	K
Template Known Secondary structure							T	S				.	.	.	.	.	T	T			S	S
Template Predicted Secondary structure												.	.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.						.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions