Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFL3
Confidence5.47%DateThu Jan 5 11:26:39 GMT 2012
Rank52Aligned Residues42
% Identity12%Templatec3iz5G_
PDB info PDB header:ribosomeChain: G: PDB Molecule:60s ribosomal protein l6 (l6e); PDBTitle: localization of the large subunit ribosomal proteins into a 5.5 a2 cryo-em map of triticum aestivum translating 80s ribosome
Resolution5.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.... .....70.........80.........90.........100..
Predicted Secondary structure 



.





























Query SS confidence 





.





































Query Sequence  YVNSGF. YNNTTFHRVIPGFMIQGGGFTEQMQQKKPNPPIKNEAD
Query Conservation 
   
 .
 
  
 

     

 
                 
  
Alig confidence 





.



























..







Template Conservation 




   







 
 










  
 
..  
 
 

Template Sequence  LITGPFKINGVPIRRVNQAYVIATSTKVDISKVNV. . QKFDDKYF
Template Known Secondary structure 



SSS



SSSS

S


S
SS


..SS


SS
Template Predicted Secondary structure 











..



Template SS confidence 












































   105....110.........120.........130......... 140.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions