Job Description P0AFL3 Confidence 100.00% Date Thu Jan 5 11:26:39 GMT 2012 Rank 26 Aligned Residues 153 % Identity 29% Template c3bkpA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:cyclophilin; PDBTitle: crystal structure of the toxoplasma gondii cyclophilin, 49.m03261 Resolution 1.80 Å

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		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.					.	.	.	.	.	.	100	.
Predicted Secondary structure																																																																						.	.	.	.
Query SS confidence																																																																						.	.	.	.
Query Sequence		K	G	D	P	H	V	L	L	T	T	S	A	G	N	I	E	L	E	L	D	K	Q	K	A	P	V	S	V	Q	N	F	V	D	Y	V	N	S	G	F	Y	N	N	T	T	F	H	R	V	I	P	G	F	M	I	Q	G	G	G	F	T	E	Q	M	Q	Q	K	K	P	.	.	.	.	N	P	P	I	K	N	E	A
Query Conservation																																																																						.	.	.	.
Alig confidence																																																																						.	.	.	.
Template Conservation
Template Sequence		S	T	R	G	K	V	V	L	H	T	S	L	G	D	L	D	V	E	L	W	A	R	E	C	P	L	A	C	R	N	F	V	Q	L	C	L	E	G	Y	Y	V	N	T	I	F	H	R	V	V	K	D	F	I	V	Q	G	G	D	P	T	G	T	G	R	G	G	A	D	T	T	F	D	G	K	P	F	D	V	E	T
Template Known Secondary structure		S		B								T	T								B	T	T	T															T	T	T	T	T		B						T	T	T							T	T	S	S	S	S						T	T	T	T			B
Template Predicted Secondary structure
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																																							.
Query SS confidence																																																							.
Query Sequence		D	N	G	L	R	N	T	R	G	T	I	A	M	A	R	T	A	D	K	D	S	A	T	S	Q	F	F	I	N	V	A	D	N	A	F	L	D	H	G	Q	R	D	F	G	Y	A	V	F	G	K	V	V	K	.	G	M	D	V	A	D	K	I	S	Q	V	P	T	H	D	V	G	P	Y	Q	N	V	P	S	K	P
Query Conservation																																																							.
Alig confidence																		.	.																				.	.	.	.	.												.																		.	.	.	.
Template Conservation																		.	.																				.	.	.	.	.																														.	.	.	.
Template Sequence		H	P	R	L	K	F	R	Y	R	G	L	V	G	V	A	N	.	.	L	G	T	N	G	N	Q	F	F	I	T	L	A	R	A	D	V	L	N	.	.	.	.	.	N	A	Y	T	L	F	G	K	V	T	G	H	T	L	Y	N	L	M	K	F	N	D	L	E	V	G	K	E	D	.	.	.	.	R	P	M	T	P
Template Known Secondary structure			T	T					S	T	T							.	.				B		S						S	S			G	G	G	T	.	.	.	.	.	T	T	S								G	G	G								T	T	S		B		G	G	G	.	.	.	.		B	S	S
Template Predicted Secondary structure																		.	.																				.	.	.	.	.																														.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.					.	.	.	.	.
		181	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	I	L	S	A	K	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	F	I	K	S	V	D	V	L
Template Known Secondary structure			B
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions