Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFL3
Confidence2.08%DateThu Jan 5 11:26:39 GMT 2012
Rank71Aligned Residues43
% Identity30%Templatec2wfoA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:glycoprotein 1; PDBTitle: crystal structure of machupo virus envelope glycoprotein2 gp1
Resolution1.73 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   106...110.........120.........130.........140.........150... ......
Predicted Secondary structure 




























.

Query SS confidence 















































.





Query Sequence  RNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVV. KGMDVA
Query Conservation        
            


 
 
     

        



 

.

 


Alig confidence 



























...........








.





Template Conservation 
  

  






 

  

 


 

...........    

    

  
 
Template Sequence  WLMDPPMLCRNKTKKEGSNIQFNISKAD. . . . . . . . . . . ESRVYGKKIRNGMRHL
Template Known Secondary structure  TTTS



TT
TT




BST...........TT
Template Predicted Secondary structure 

















...........

Template SS confidence 






















































   156...160.........170.........180... ......190.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions