Job Description P0AFL3 Confidence 100.00% Date Thu Jan 5 11:26:39 GMT 2012 Rank 20 Aligned Residues 153 % Identity 29% Template c2he9B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:nk-tumor recognition protein; PDBTitle: structure of the peptidylprolyl isomerase domain of the2 human nk-tumour recognition protein Resolution 2.00 Å

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		28	.	30	.	.	.	.						.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60												.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure									.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	H	V	L	L	T	.	.	.	.	.	T	S	A	G	N	I	E	L	E	L	D	K	Q	K	A	P	V	S	V	Q	N	F	V	D	Y	V	.	.	.	.	.	.	.	.	.	.	.	N	S	G	F	Y	N	N	T	T	F	H	R	V	I	P	G	F	M	I	Q	G	G	G	F	T	E	Q	M	Q	Q	K
Query Conservation									.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	Q	C	H	F	D	I	E	I	N	R	E	P	V	G	R	I	M	F	Q	L	F	S	D	I	C	P	K	T	C	K	N	F	L	C	L	C	S	G	E	K	G	L	G	K	T	T	G	K	K	L	C	Y	K	G	S	T	F	H	R	V	V	K	N	F	M	I	Q	G	G	D	F	S	E	G	N	G	K	G
Template Known Secondary structure												T	T												T	T	T														T	T	T		B		T	T	T		S	B	S			T	T		B						T	T	T							T	T	T	S	S	S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		92	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure									.	.
Query SS confidence									.	.
Query Sequence		K	P	N	P	P	I	K	.	.	N	E	A	D	N	G	L	R	N	T	R	G	T	I	A	M	A	R	T	A	D	K	D	S	A	T	S	Q	F	F	I	N	V	A	D	N	A	F	L	D	H	G	Q	R	D	F	G	Y	A	V	F	G	K	V	V	K	G	M	D	V	A	D	K	I	S	Q	V	P	T	H	D
Query Conservation									.	.
Alig confidence									.	.																																									.	.	.	.	.
Template Conservation																																																			.	.	.	.	.
Template Sequence		G	E	S	I	Y	G	G	Y	F	K	D	E	N	F	I	L	K	H	D	R	A	F	L	L	S	M	A	N	R	G	K	H	T	N	G	S	Q	F	F	I	T	T	K	P	A	P	H	L	D	.	.	.	.	.	G	V	H	V	V	F	G	L	V	I	S	G	F	E	V	I	E	Q	I	E	N	L	K	T	D	A
Template Known Secondary structure					T	T	S	S		B							S				S	T	T							S	S	T	T		B	S	S						S	S			G	G	G	T	.	.	.	.	.	T	T	S																		T	S		B		T
Template Predicted Secondary structure																																																			.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.						.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	P	Y	Q	N	V	P	S	K	P	V	V	I	L	S	A	K	V	L
Query Conservation
Alig confidence				.	.	.	.
Template Conservation				.	.	.	.
Template Sequence		A	S	.	.	.	.	R	P	Y	A	D	V	R	V	I	D	C	G	V	L
Template Known Secondary structure		T		.	.	.	.		B	S	S
Template Predicted Secondary structure				.	.	.	.
Template SS confidence
		161	.					.	.	.	.	.	.	.	170	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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