Job Description P0AFL3 Confidence 100.00% Date Thu Jan 5 11:26:39 GMT 2012 Rank 28 Aligned Residues 151 % Identity 31% Template c2ck1A_ PDB info PDB header:isomerase Chain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase e; PDBTitle: the structure of oxidised cyclophilin a from s. mansoni Resolution 1.80 Å

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		29	30	.	.	.	.	.	.						.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.			.	.	.
Predicted Secondary structure										.	.	.	.	.																											.	.	.																																		.	.
Query SS confidence										.	.	.	.	.																											.	.	.																																		.	.
Query Sequence		P	H	V	L	L	T	T	S	.	.	.	.	.	A	G	N	I	E	L	E	L	D	K	Q	K	A	P	V	S	V	Q	N	F	V	D	Y	V	N	S	.	.	.	G	F	Y	N	N	T	T	F	H	R	V	I	P	G	F	M	I	Q	G	G	G	F	T	E	Q	M	Q	Q	K	K	P	N	P	.	.	P	I	K
Query Conservation										.	.	.	.	.																											.	.	.																																		.	.
Alig confidence										.	.	.	.	.																											.	.	.																																		.	.
Template Conservation
Template Sequence		P	R	V	F	F	D	I	R	I	G	N	G	D	A	G	R	I	V	M	E	L	R	S	D	I	V	P	R	T	A	E	N	F	R	A	L	C	T	G	E	R	G	F	G	Y	H	N	C	C	F	H	R	V	I	P	Q	F	M	C	Q	G	G	D	F	V	K	G	D	G	T	G	G	K	S	I	Y	G	R	K	F
Template Known Secondary structure											T	T												T	T	T														T	T	T	S			S	T	T		B						T	T	T							T	T	T	S	S	S	S				B	T	T	B	S		B
Template Predicted Secondary structure
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	E	A	D	N	G	L	R	N	T	R	G	T	I	A	M	A	R	T	A	D	K	D	S	A	T	S	Q	F	F	I	N	V	A	D	N	A	F	L	D	H	G	Q	R	D	F	G	Y	A	V	F	G	K	V	V	K	G	M	D	V	A	D	K	I	S	Q	V	P	T	H	D	V	G	P	Y	Q	N	V	P	S
Query Conservation
Alig confidence																																										.	.	.	.	.																										.	.	.	.	.
Template Conservation																																										.	.	.	.	.																										.	.	.	.	.
Template Sequence		D	D	E	N	F	Q	L	R	H	E	G	F	G	V	L	S	M	A	N	S	G	P	N	T	N	G	S	Q	F	F	I	C	T	T	K	C	D	W	L	D	.	.	.	.	.	G	K	H	V	V	F	G	R	V	V	D	G	Q	N	V	V	K	K	M	E	S	V	G	S	K	.	.	.	.	.	S	G	K	V	K
Template Known Secondary structure								S				S	T	T							S	S	T	T		B		S						S	S			G	G	G	T	.	.	.	.	.	T	T	S																G	G	G	G			T	.	.	.	.	.	T				S
Template Predicted Secondary structure																																										.	.	.	.	.																										.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130						.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160
		179	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	V	V	I	L	S	A	K	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	P	V	I	I	S	R	C	G	E	L
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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