Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFL3
Confidence100.00%DateThu Jan 5 11:26:39 GMT 2012
Rank4Aligned Residues164
% Identity31%Templatec1ihgA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:cyclophilin 40; PDBTitle: bovine cyclophilin 40, monoclinic form
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20..... ....30...... ...40.........50.........60 .........70........
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Query Sequence  SALSPAAMAA. KGDPHVLLTTS. . . . . AGNIELELDKQKAPVSVQNFVDYV. . . . . . . . . . . NSGFYNNTTFHRVIPGFM
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Template Sequence  SHPSPQAKPSNPSNPRVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFM
Template Known Secondary structure 
B



SSSS
TTS
TT
TTT

TT
B
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TT
BTTT
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   7980.........90... ......100.........110.........120.........130.........140.........150.....
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Query Sequence  IQGGGFTEQMQQKKP. . . NPPIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKG
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Template Sequence  IQGGDFSNQNGTGGESIYGEKFEDE. NFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLD. . . . . GKHVVFGQVIKG
Template Known Secondary structure 

TTTSSSS


BTTBS
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STT

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S
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GGGT.....TTS

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   82.......90.........100...... ...110.........120.........130.........140... ......150.....
 
   156...160.........170.........180.........190
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Query Sequence  MDVADKISQVPTHDVGPYQNVPSKPVVILSAKVLP
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Template Sequence  MGVAKILENVEVK. . . . . GEKPAKLCVIAECGELK
Template Known Secondary structure  TS
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   156...160........ .170.........180.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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