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Job DescriptionP37339
Confidence99.62%DateThu Jan 5 11:55:20 GMT 2012
Rank65Aligned Residues188
% Identity17%Templated1neka2
SCOP infoFAD/NAD(P)-binding domain FAD/NAD(P)-binding domain Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  YDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNG
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Template Sequence  FDAVVIGAGGAGMRAALQISQS. . GQTCALLSK. VFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIGDQD.
Template Known Secondary structure  S


ST..T



S.S
GGGSGGGG

S




SSS


TS
S
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   8.10.........20......... 30........ .40.........50.........60.........70.........80...
 
   82.......90.........100.........110.........120.........130.. .......140.........150......
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Query Sequence  IRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNIT. . . . . GLGGIFVPSSGIVSYRDVTAAMAK
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Template Sequence  . . . . . . . . . . . . AIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQ
Template Known Secondary structure  ............TT



B
S
BTTB


SSB

TTSSS

TT
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   84.....90.........100.........110.........120.........130.........140.........150.
 
   157..160.........170.........180.... .....190.........200.....
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Query Sequence  IFQSRGGEIIYNAEVSGLNEHKNGVVIR. . . . . . . TRQGGEYEASTLISCSGLMAD
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Template Sequence  QNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGR
Template Known Secondary structure  TT

S
TTS
TTT

S





GG
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   152.......160.........170.........180.........190.........200.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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