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Job DescriptionP37339
Confidence99.53%DateThu Jan 5 11:55:20 GMT 2012
Rank89Aligned Residues323
% Identity11%Templatec3qj4A_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:renalase; PDBTitle: crystal structure of human renalase (isoform 1)
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MYDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQN
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Template Sequence  MAQVLIVGAGMTGSLCAALLRRQTGPLYLAVWDKADDSGGRMTTACSP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . HN
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SS




SSSSS
GGG

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   1........10.........20.........30.........40........ .50
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  GIRYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQS
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Template Sequence  PQCTADLGAQYITCTPHYAKKHQRFYDELLAYGVLRPL. . . . . . . . . . . . SSPIEGMVMGDCNFVAPQGISSIIKHYLKE
Template Known Secondary structure  TT
SS



SSTTTS

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S
T





TT
TT
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   52.......60.........70.........80......... 90.........100.........110.........
 
   161........170.........180.........190.........200....... ..210.........220.........230
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Query Sequence  RGGEIIYNAEVSGLNEHKNGVVIRTRQGGEYEASTLISCSGLMADRL. . . . . . . . . . VKMLGLEPGFIICPFRGEYFRLA
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Template Conservation                                                                                  
Template Sequence  SGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLISECQRQQLEAVSYSSRYALGLFYE
Template Known Secondary structure  T
SS


SSSSSS

S
S
TT
BSTS
T

B


S
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   122.......130.........140.........150.........160.........170.........180.........190.........200.
 
   231........240.........250.........260.........270.........280.........290.........300.........310
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Query Sequence  PEHNQIVNHLIYPIPDPAMPFLGVHLTRMIDGSVTVGPNAVLAFKREGYRKRDFSFSDTLEILGSSGIRRVLQNHLRSGL
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Template Conservation                     ..............................                               
Template Sequence  AGTDVPWAGQYITSNPCIR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FVSIDNKKRNIESSIGPSLVIHTTVPFGVTY
Template Known Secondary structure  S



S
S
SS
SS..............................TT







T
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   202.......210.........220 .........230.........240.........250.
 
   311........320.........330.........340.........350.........360.........370... ......380.........
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Query Sequence  GEMKNSLCKSGYLRLVQKYCPRLSLSDLQPWPAGVRAQAVSPDGKLIDDFLFVTTPRTIHTCN. APSPAATSAIPIGAHI
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Template Sequence  LEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANCPGQMTLHHKPFLACGGDGFTQSNFDGCITSALCV
Template Known Secondary structure  TTS
S
S



STT
SBSS

SSS
S
TTT
SGGGS
SS
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   255....260.........270.........280.........290.........300.........310.........320.........330....
 
   390.....
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Query Sequence  VSKVQT
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Template Conservation 
  
  
Template Sequence  LEALKN
Template Known Secondary structure  TT
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   335....340
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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