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Job DescriptionP37339
Confidence99.53%DateThu Jan 5 11:55:20 GMT 2012
Rank88Aligned Residues186
% Identity22%Templatec3nrnA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:uncharacterized protein pf1083; PDBTitle: crystal structure of pf1083 protein from pyrococcus furiosus,2 northeast structural genomics consortium target pfr223
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40...... ...50.........60.........70......
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Query Sequence  FVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHN. . . . . . . SGVIHAGVYYTPGSLKAQFCLAGNRATKAF
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Template Sequence  AVVVGAGLGGLLAGAFLARN. . GHEIIVLEKSAXIGGRFTNLPYKGFQLSTGALHXIPHGEDGPLA. . . . . . . . HLLRIL
Template Known Secondary structure  S
ST..T

SSSSS
TTSSTTSSS
STTTTSS........
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   3......10.........20.. .......30.........40.........50.........60...... ...70..
 
   77..80.........90.... .....100.........110......
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Query Sequence  CDQNGIRYDNCGKMLVAT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . SDLEMERMRALWERTAANGIER
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Template Sequence  GAKVEIVNSNPKGKILWEGKIFHYRESWKFLSKLLAEIRXNKLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSL
Template Known Secondary structure  T




SSS
TTGGGGGGG



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SBT


SS
G
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   73......80.........90.........100.........110.........120.........130.........140.........150..
 
   117..120.........130.........140.........150.........160.........170.........180.........190......
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Query Sequence  EWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRGGEIIYNAEVSGLNEHKNGVVIRTRQGGEYEASTL
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Template Sequence  SDLTALELAKEIRAALRWGGPGLIRGG. . . CKAVIDELERIIXENKGKILTRKEVVEINIEEKK. . VYTRDNEEYSFDVA
Template Known Secondary structure  GGSB
S
TT
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TTTT..TT


S
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   161........170.........180....... ..190.........200.........210.........220. ........230.....
 
   197..200....
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Query Sequence  ISCSGLMA
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Template Sequence  ISNVGVRE
Template Known Secondary structure 
S
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   236...240...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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