Job Description P37339 Confidence 99.27% Date Thu Jan 5 11:55:20 GMT 2012 Rank 164 Aligned Residues 178 % Identity 13% Template c3k30B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:histamine dehydrogenase; PDBTitle: histamine dehydrogenase from nocardiodes simplex Resolution 2.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	V	I	I	G	G	G	I	I	G	M	S	T	A	M	Q	L	I	D	V	Y	P	D	A	R	I	A	L	L	E	K	E	S	A	P	A	C	H	Q	T	G	H	N	S	G	V	I	H	A	G	V	Y	Y	T	P	G	S	L	K	A	Q	F	C	L	A	G	N	R	A	T	K	A	F	C	D	Q	N	G	I	R
Query Conservation
Alig confidence																						.	.															.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																						.	.															.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Sequence		V	L	V	V	G	A	G	P	S	G	L	E	A	A	R	A	L	G	V	R	.	.	G	Y	D	V	V	L	A	E	A	G	R	D	L	G	.	.	.	.	.	.	.	.	G	R	V	T	Q	E	S	A	L	P	G	L	S	A	W	G	R	V	K	E	Y	R	E	A	V	L	A	E	.	.	.	.	.	.	.	.
Template Known Secondary structure								S														.	.	T								S	S	S	S	S		.	.	.	.	.	.	.	.	T							T	S	T	T		G	G	G	G												T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																						.	.															.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.			.	.	.	.	.	.	420	.	.	.	.	.	.	.									.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																						.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	N	C	G	K	M	L	V	A	T	S	D	L	E	M	E	R	M	R	A	L	W	E	R	T	A	A	N	G	I	E	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	L	N	A	D	E	L	R	E	R	E	P	N	I	T	G	L	G	G	I	F	V	P	S	S
Query Conservation																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	L	P	N	V	E	I	Y	R	E	S	P	M	T	G	D	D	I	V	E	F	G	F	E	H	V	I	T	A	T	G	A	T	W	R	T	D	G	V	A	R	F	H	T	T	A	L	P	I	A	E	G	M	Q	V	L	G	P	D	D	L	F	A	G	R	L	P	D	G	K	K	V	V	V	Y	D	D	D	H
Template Known Secondary structure		.	.		T	T					S	S											T	T														S	S			S	S	S		S	S				B		T	T	S											T				S	S	S								S
Template Predicted Secondary structure		.	.
Template SS confidence
				456	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.
		143																													.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.		.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query SS confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Query Sequence		G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	S	Y	R	D	V	T	A	A	M	A	K	I	F	Q	S	R	G	G	E	I	I	Y	N	A	E	V	S	G	L	N	E	H	K	N	G	V	V	.	I	R	T	R	Q	G	G	E	Y	E	A
Query Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.
Template Conservation
Template Sequence		Y	Y	L	G	G	V	V	A	E	L	L	A	Q	K	G	Y	E	V	S	I	V	T	P	G	A	Q	V	S	S	W	T	N	N	T	F	E	V	N	R	I	Q	R	R	L	I	E	N	G	V	A	R	V	T	D	H	A	V	V	A	V	G	A	G	G	V	T	V	R	D	T	Y	A	S	I	E	R	E	L	E	C
Template Known Secondary structure		S	S												T	T								S	S	S	S	T	T	G	G	G	G	T	T	T												T	T						S								T	T							T	T	T
Template Predicted Secondary structure
Template SS confidence
		534	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.
		194	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	L	I	S	C	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	V	V	M	V	T	A
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		614	.	.	.	.	.	620	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions