Job Description P37339 Confidence 99.76% Date Thu Jan 5 11:55:20 GMT 2012 Rank 30 Aligned Residues 307 % Identity 14% Template c3i3lA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alkylhalidase cmls; PDBTitle: crystal structure of cmls, a flavin-dependent halogenase Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	F	V	I	I	G	G	G	I	I	G	M	S	T	A	M	Q	L	I	D	V	Y	P	D	A	R	I	A	L	L	E	K	E	S	A	P	A	C	H	Q	T	G	H	N	S	G	V	I	H	A	G	V	Y	Y	T	P	G	S	L	K	A	Q	F	C	L	A	G	N	R	A	T	K	A	F	C	D	Q	N	G
Query Conservation
Alig confidence																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Sequence		S	K	V	A	I	I	G	G	G	P	A	G	S	V	A	G	L	T	L	H	K	L	.	.	G	H	D	V	T	I	Y	E	R	S	A	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	R	V	G	E	S	L	L	P	G	T	M	S	I	L	N	R	L	.	.	.	.	.	.	.	.
Template Known Secondary structure										S													T	.	.	T								S	S		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							B												T	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.																	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Y	D	N	C	G	K	M	L	V	A	T	S	D	L	E	M	E	R	M	R	A	L	W	E	R	T	A	A	N	G	I	E	R	E	W	L	N	A	D	E	L	R	E	R	E	P	N	I	T	G	L	G	G	I	F	V	P	S	S	G	I	V	S	Y	R	D	V	T	A	A	M	A	K	I	F	Q	S	R
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	Q	E	K	I	D	A	Q	N	Y	V	K	K	P	S	A	T	F	L	W	G	Q	D	Q	A	P	W	T	F	S	F	A	A	P	A	P	W	V	F	D	H	A	V	Q	V	K	R	E	E	F	D	K	L	L	L	D	E	A	R	S	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																					S	S	S													T	T			S																					T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		G	G	E	I	I	Y	N	A	E	V	S	G	L	N	E	H	K	N	G	V	V	I	R	T	R	.	.	.	.	Q	G	G	E	Y	E	A	S	T	L	I	S	C	S	G	L	M	A	D	R	L	V	K	M	L	G	L	E	P	G	F	I	I	C	P	F	R	G	E	Y	F	R	L	A	P	E	H	N	Q	I	V
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.																				.
Template Conservation																																																		.
Template Sequence		G	I	T	V	H	E	E	T	P	V	T	D	V	D	L	S	D	P	D	R	V	V	L	T	V	R	R	G	G	E	S	V	T	V	E	S	D	F	V	I	D	A	G	G	S	G	G	P	.	I	S	R	K	L	G	V	R	Q	Y	D	E	F	Y	R	N	F	A	V	W	S	Y	F	K	L	K	D	P	F	E	G
Template Known Secondary structure		T					T	T										S	T	T									T	T								S							G	G	G			.						T																						S			S
Template Predicted Secondary structure																																																		.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	L	I	Y	P	I	P	D	P	A	M	P	F	L	G	V	H	L	T	R	M	I	D	G	S	V	T	V	G	P	N	A	V	L	A	F	K	R	E	G	Y	R	K	R	D	F	S	F	S	D	T	L	E	I	L	G	S	S	G	I	R	R	V	L	Q	N	H	L	R	S	G	L	G	E	M	K	N	S	L
Query Conservation
Alig confidence																	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	L	K	G	T	T	Y	S	I	T	F	E	D	G	W	.	V	W	M	I	P	I	K	D	D	L	Y	S	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	V	D	R	S	K	S	A	E	V	R	E	Q
Template Known Secondary structure		T	T	T	T								T	T			.							S	S	S						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					G	G	G
Template Predicted Secondary structure																	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.		.	.	.	.	220	.	.	.	.	.	.	.	.	.																																					230	.	.	.	.	.	.	.	.	.	240	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.											.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.
Query Sequence		C	K	S	G	Y	L	R	L	V	Q	K	Y	C	P	.	.	.	.	.	.	.	.	.	.	R	L	S	L	S	D	L	Q	P	W	P	A	G	V	R	A	Q	A	V	S	P	D	G	K	L	I	D	D	F	L	F	V	T	T	P	R	T	I	H	T	C	N	A	P	S	P	A	A	T	S	A	I	P	I	G	A
Query Conservation																.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.
Template Sequence		G	A	D	A	F	Y	S	S	T	L	A	K	C	A	K	A	M	D	I	L	G	G	A	E	Q	V	D	E	V	R	I	V	Q	D	W	S	Y	D	T	E	V	F	S	A	D	R	F	F	L	C	G	D	A	A	C	F	T	D	P	.	.	.	.	.	.	.	L	F	S	Q	G	V	H	L	A	S	Q	S	A	V
Template Known Secondary structure												T	T									T	T					S													S		S			T	T					G	G	G	T		B			G	.	.	.	.	.	.	.	G	G
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.	.	.	.	.
		388	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	I	V	S	K	V	Q	T	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	A	A	A	I	D	R	I	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		317	.	.	320	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions