Job Description P37339 Confidence 99.53% Date Thu Jan 5 11:55:20 GMT 2012 Rank 90 Aligned Residues 386 % Identity 15% Template c2jbvA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:choline oxidase; PDBTitle: crystal structure of choline oxidase reveals insights into2 the catalytic mechanism Resolution 1.86 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	F	V	I	I	G	G	G	I	I	G	M	S	T	A	M	Q	L	I	D	.	V	Y	P	D	A	R	I	A	L	L	E	K	E	S	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.		.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.
Template Sequence		F	D	Y	I	V	V	G	G	G	S	A	G	A	A	V	A	A	R	L	S	E	D	P	.	.	A	V	S	V	A	L	V	E	A	G	P	D	D	R	G	V	P	E	V	L	Q	L	D	R	W	M	E	L	L	E	S	G	Y	D	W	D	Y	P	I	E	P	Q	E	N	G	N	S	F	M	R	H	A	R	A	K
Template Known Secondary structure										S											T	T	S	T	.	.	T	S							S	S				T	T						B	G	G	G	G	G	G	G	T	T	S	T	T	B					B				S	S	S		T	T						B
Template Predicted Secondary structure																									.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
			39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.						.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80							.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
Predicted Secondary structure		.																											.	.	.	.	.																	.	.	.	.	.	.
Query SS confidence		.																											.	.	.	.	.																	.	.	.	.	.	.
Query Sequence		.	A	C	H	Q	T	G	H	N	S	G	V	I	H	A	G	V	Y	Y	T	P	G	S	L	K	A	Q	.	.	.	.	.	F	C	L	A	G	N	R	A	T	K	A	F	C	D	Q	N	.	.	.	.	.	.	G	I	R	Y	D	N	C	G	K	M	L	V	A	T	S	D	L	E	M	E	R	M	R	A	L	W
Query Conservation		.																											.	.	.	.	.																	.	.	.	.	.	.
Alig confidence		.																											.	.	.	.	.																	.	.	.	.	.	.
Template Conservation
Template Sequence		V	M	G	G	C	S	S	H	N	S	C	I	A	F	W	A	P	R	E	D	L	D	E	W	E	A	K	Y	G	A	T	G	W	N	A	E	A	A	W	P	L	Y	K	R	L	E	T	N	E	D	A	G	P	D	A	P	H	H	G	D	S	G	P	V	H	L	M	N	V	P	P	K	D	P	T	G	V	A	L	L
Template Known Secondary structure		S	T	T	G	G	G	G	T	S			B															T	T			T	T		S															T	T		B	T	T	B	T	T	S		B	S		S								S
Template Predicted Secondary structure
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.
Predicted Secondary structure																																																																												.	.	.	.
Query SS confidence																																																																												.	.	.	.
Query Sequence		E	R	T	A	A	N	G	I	E	R	E	W	L	N	A	D	E	L	R	E	R	E	P	N	I	T	G	L	G	G	I	F	V	P	S	S	G	I	V	S	Y	R	D	V	T	A	A	M	A	K	I	F	Q	S	R	G	G	E	I	I	Y	N	A	E	V	S	G	L	N	E	H	K	N	G	.	.	.	.	V	V
Query Conservation																																																																												.	.	.	.
Alig confidence																	.	.																													.	.																												.	.	.	.
Template Conservation																	.	.																													.	.
Template Sequence		D	A	C	E	Q	A	G	I	P	R	A	K	F	N	T	.	.	G	T	T	V	V	N	G	A	N	F	F	Q	I	N	R	R	A	D	G	T	R	S	S	S	S	V	S	Y	.	.	I	H	P	I	V	E	Q	E	N	F	T	L	L	T	G	L	R	A	R	Q	L	V	F	D	A	D	R	R	C	T	G	V	D
Template Known Secondary structure							T	T			B			S	S	S	.	.	S	S			S	S									B		T	T	S	B	B								.	.	T	G	G	G	T	T		T	T						S										T	T	S	B
Template Predicted Secondary structure																	.	.																													.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.					.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.																					.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure													.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query SS confidence													.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Query Sequence		I	R	T	R	Q	G	G	E	Y	E	A	.	.	.	.	S	T	L	I	S	C	S	G	L	.	M	A	D	R	L	V	K	M	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	P	G	F	I	I	C	P	F	R	G	E	Y	F	R	L	A	P	E	H	.	.	.	.
Query Conservation													.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Alig confidence													.	.	.	.										.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.
Template Conservation
Template Sequence		I	V	D	S	A	F	G	H	T	H	R	L	T	A	R	N	E	V	V	L	S	T	G	A	I	D	T	P	K	L	L	M	L	S	G	I	G	P	A	A	H	L	A	E	H	G	I	E	V	L	V	D	S	P	G	V	G	E	H	L	Q	D	H	P	E	G	V	V	Q	F	E	A	K	Q	P	M	V	A	E	S
Template Known Secondary structure				S	S	T	T	S															S												T	T										T	T				S				T	T	T	T		S	B	B												S	S				S
Template Predicted Secondary structure
Template SS confidence
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
				234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	N	Q	I	V	N	H	L	I	Y	P	I	P	D	P	A	M	P	F	L	G	V	H	L	T	R	M	I	D	G	S	V	T	V	G	P	N	A	V	L	A	F	K	R	E	G	Y	R	K	R	D	F	S	F	S	D	T	L	E	I	L	G	S	S	G	I	R	R	V	L	Q	N	H	L	R	S	G	L	G
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		T	Q	W	W	E	I	G	I	F	T	P	T	E	D	G	L	D	R	P	D	L	M	M	H	Y	G	S	V	P	F	D	M	N	T	L	R	H	G	Y	P	T	T	E	N	G	F	S	L	T	P	N	V	T	H	A	R	S	R	G	T	V	R	L	R	S	R	D	F	R	D	K	P	M	V	D	P	R	Y	F	T
Template Known Secondary structure		S	S	S									S	S	T	T		S	S		S							S	S				T	T	T	G	G	G	T					S	S									T	T					B					S	S	S		T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		328	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
		312	.	.	.	.	.	.	.	320	.	.	.			.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340																												.	.	.	.	.	.	.	.			.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query SS confidence														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Query Sequence		E	M	K	N	S	L	C	K	S	G	Y	L	.	.	R	L	V	Q	K	Y	C	P	R	L	S	L	S	D	L	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	P	A	G	V	R	A	Q	.	.	A	V	S	P	D	G	K	L	I	D	D	F
Query Conservation														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Alig confidence														.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.	.
Template Conservation
Template Sequence		D	P	E	G	H	D	M	R	V	M	V	A	G	I	R	K	A	R	E	I	A	A	Q	P	A	M	A	E	W	T	G	R	E	L	S	P	G	V	E	A	Q	T	D	E	E	L	Q	D	Y	I	R	K	T	H	N	T	V	Y	H	P	V	G	T	V	R	M	G	A	V	E	D	E	M	S	P	L	D	P	E	L
Template Known Secondary structure			T	T																			T	S	G	G	G	T	T	T							S		T	T			S																S			B		T	T		B			T	T		T	T		S	B		T	T
Template Predicted Secondary structure
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.								.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.
Query Sequence		L	F	V	T	T	P	R	T	I	H	T	.	.	.	.	.	.	.	C	N	A	P	S	P	A	A	T	S	A	I	P	I	G	A	H	I	V	S	K	V	Q
Query Conservation													.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.												.
Template Conservation																															.
Template Sequence		R	V	K	G	V	T	G	L	R	V	A	D	A	S	V	M	P	E	H	V	T	V	N	P	N	I	T	V	M	.	M	I	G	E	R	C	A	D	L	I	R
Template Known Secondary structure		B	B	T	T	S	B	S					S	G	G	G		S	S			S	S								.											.
Template Predicted Secondary structure																															.
Template SS confidence
		488	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.		.	.	.	520	.	.	.	.	.	.	.