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Job DescriptionP37339
Confidence99.37%DateThu Jan 5 11:55:20 GMT 2012
Rank143Aligned Residues203
% Identity13%Templatec2igoG_
PDB info PDB header:oxidoreductaseChain: G: PDB Molecule:pyranose oxidase; PDBTitle: crystal structure of pyranose 2-oxidase h167a mutant with 2-2 fluoro-2-deoxy-d-glucose
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.......
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Query Sequence  YDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  YDVVIVGSGPIGCTYARELVGA. . GYKVAMFDIGEIDSGLKIGAHKKNTVEYQKNIDKFVNVIQGQLMSVSVPVNTLVVD
Template Known Secondary structure 

ST..T
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STTSTT

TT
SSGGGT
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   47..50.........60........ .70.........80.........90.........100.........110.........120....
 
   38.40.........50.........60.........70.........80..
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNGI
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Template Sequence  TLSPTSWQASTFFVRNGSNPEQDPLRNLSGQAVTRVVGGMSTAWTCATPRFDREQRPLLVKDDADADDAEWDRLYTKAES
Template Known Secondary structure 
S
TTS


SS

S
TT

TT

TTS

TT


STTGGGGT


B




GGGS

SSTT
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   125....130.........140.........150.........160.........170.........180.........190.........200....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  RYDNCGKMLVATSDLEMERMRALWERTAANGIEREWLNADELREREPNITGLGGIFVPSSGIVSYRDVTAAMAKIFQSRG
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Template Sequence  YFQTGTDQFKESIRHNLVLNKLTEEYKGQRDFQQIPLAATRRSPTFVEWSSANTVFDLQNRPNTD. . . . . . . . . . APEER
Template Known Secondary structure  TS
TTTT
TTTT




TT






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   205....210.........220.........230.........240.........250.........260......... 270....
 
   163......170.........180..... ....190.........200.. .......210......
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Query Sequence  GEIIYNAEVSGLNEHKNGVVIRT. . . . . . . . RQGGEYEASTLISCSGL. MADRLVKMLGLEPG
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Template Sequence  FNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVNSGFGQL
Template Known Secondary structure  S
TTSS
TTT


S
TTTSS

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   275....280.........290.........300.........310.........320.........330.......
 
Download:Text version

No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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