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Job DescriptionP37339
Confidence99.45%DateThu Jan 5 11:55:20 GMT 2012
Rank112Aligned Residues200
% Identity20%Templatec2c3dB_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:2-oxopropyl-com reductase; PDBTitle: 2.15 angstrom crystal structure of 2-ketopropyl coenzyme m2 oxidoreductase carboxylase with a coenzyme m disulfide3 bound at the active site
Resolution2.15 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  YDFVIIGGGIIGMSTAMQLIDVYPDARIALLEKESAPACHQTGHNSGVIHAGVYYTPGSLKAQFCLAGNRATKAFCDQNG
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Template Sequence  YDAIFIGGGAAGRFGSAYLRAM. . GGRQLIVDRWPFL. . . . . . . . . . . . . GGSCPHNACVPHHLFSDCAAELMLARTFSG
Template Known Secondary structure  BS

ST..T

SSSSS.............STSTTT
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   44.....50.........60..... ....70........ .80.........90.........100........
 
   82.......90.........100.........110..
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Query Sequence  IRYDNCGKMLVATSDLEMERMRALWERTAAN. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  QYWFPDMTEKVVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDNHTVEAAGKVFKAKNLILAVGAGPGT
Template Known Secondary structure  STT



TT



TTS


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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   113......120.........130.........140....... ..150.........160.
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Query Sequence  . . . . GIEREWLNADELREREPNITGLGGIFVPSSGIVSY. . . . . . . . . . . . . . . . . . . . . . . . . . . RDVTAAMAKIFQSR
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Template Sequence  LDVPGVNAKGVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQ
Template Known Secondary structure 

STTTTSBT


S


S

STT

SS
TTTT


T
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   189190.........200.........210.........220.........230.........240.........250.........260........
 
   162.......170......... 180.........190.........200. ........210......
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Query Sequence  GGEIIYNAEVSGLNEHKN. . . . . GVVIRTRQGGEYEASTLISCSG. . LMADRLVKMLGLEPG
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Template Sequence  GMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSAELAKILGLDLG
Template Known Secondary structure  T

S

TTSBTT
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T

B
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   269270.........280.........290.........300.........310.........320.........330
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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