Job Description P37339 Confidence 99.25% Date Thu Jan 5 11:55:20 GMT 2012 Rank 171 Aligned Residues 188 % Identity 19% Template c2bcpA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadh oxidase; PDBTitle: structural analysis of streptococcus pyogenes nadh oxidase:2 c44s nox with azide Resolution 2.10 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.		.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		D	F	V	I	I	G	G	G	I	I	G	M	S	T	A	M	Q	L	I	D	V	.	Y	P	D	A	R	I	A	L	L	E	K	E	S	A	P	A	C	H	Q	T	G	H	N	S	G	V	I	H	A	G	V	Y	Y	T	P	G	S	L	K	A	Q	F	C	L	A	G	N	R	A	T	K	A	F	C	D	Q	N	G
Query Conservation																							.
Alig confidence																							.																																						.	.	.	.	.	.	.	.	.	.
Template Conservation																																																													.	.	.	.	.	.	.	.	.	.
Template Sequence		K	I	V	V	V	G	A	N	H	A	G	T	A	C	I	K	T	M	L	T	N	Y	G	D	A	N	E	I	V	V	F	D	Q	N	S	N	I	S	F	L	G	S	G	M	A	L	W	I	G	E	Q	I	A	G	P	E	G	L	F	.	.	.	.	.	.	.	.	.	.	Y	S	D	K	E	E	L	E	S	L	G
Template Known Secondary structure									S															G	G	G	S							S	S	S				B		T	T							T	T	S	S	S	S	S	T	T	S	B	.	.	.	.	.	.	.	.	.	.									T	T	T
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.											.	.	.	.	.	.	.	.	70	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100																																																							.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	R	Y	D	N	C	G	K	M	L	V	A	T	S	D	L	E	M	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	M	R	A	L	W	E
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	V	Y	M	E	S	P	V	Q	S	I	D	Y	D	A	K	T	V	T	A	L	V	D	G	K	N	H	V	E	T	Y	D	K	L	I	F	A	T	G	S	Q	P	I	L	P	P	I	K	G	A	E	I	K	E	G	S	L	E	F	E	A	T	L	E	N	L	Q	F	V	K	L	Y	Q	N	S	A	D	V	I
Template Known Secondary structure						T	T								T	T	T	T						S	S	S	S							S														S		B	T			B		T	T		S	S			B	S	S	T	T					S	S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		108	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.				.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.																													.	.	.
Query SS confidence														.	.	.	.	.	.																													.	.	.
Query Sequence		R	T	A	A	N	G	I	E	R	E	W	L	.	.	.	.	.	.	N	A	D	E	L	R	E	R	E	P	N	I	T	G	L	G	G	I	F	V	P	S	S	G	I	V	S	Y	.	.	.	R	D	V	T	A	A	M	A	K	I	F	Q	S	R	G	G	E	I	I	Y	N	A	E	V	S	G	L	N	E	H	K
Query Conservation														.	.	.	.	.	.																													.	.	.
Alig confidence														.	.	.	.	.	.																													.	.	.																													.
Template Conservation																																																																															.
Template Sequence		A	K	L	E	N	K	D	I	K	R	V	A	V	V	G	A	G	Y	I	G	V	E	L	A	E	A	F	Q	R	K	G	K	E	V	V	L	I	D	V	V	D	T	C	L	A	G	Y	Y	D	R	D	L	T	D	L	M	A	K	N	M	E	E	H	G	I	Q	L	A	F	G	E	T	V	K	E	V	A	.	G	N
Template Known Secondary structure				T	T		T	T										S													T	T								S	S	S	S	S	S	T	T	T	S														T	T	T						S								.		S
Template Predicted Secondary structure																																																																															.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	V	V	I	R	T	R	Q	G	G	E	Y	E	A	S	T	L	I	S	C	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	V	E	K	I	I	T	D	K	N	E	Y	D	V	D	M	V	I	L	A	V	G
Template Known Secondary structure		S	S							S	S						S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions