Job Description P37339 Confidence 100.00% Date Thu Jan 5 11:55:20 GMT 2012 Rank 1 Aligned Residues 380 % Identity 18% Template c1pj6A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:n,n-dimethylglycine oxidase; PDBTitle: crystal structure of dimethylglycine oxidase of arthrobacter2 globiformis in complex with folic acid Resolution 1.65 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																												.											.
Query SS confidence																												.											.
Query Sequence		D	F	V	I	I	G	G	G	I	I	G	M	S	T	A	M	Q	L	I	D	V	Y	P	D	A	R	.	I	A	L	L	E	K	E	S	A	P	.	A	C	H	Q	T	G	H	N	S	G	V	I	H	A	G	V	Y	Y	T	P	G	S	L	K	A	Q	F	C	L	A	G	N	R	A	T	K	A	F	C	D	Q	N
Query Conservation																												.											.
Alig confidence																							.	.				.											.														.	.	.
Template Conservation																							.	.																													.	.	.
Template Sequence		R	I	V	I	I	G	A	G	I	V	G	T	N	L	A	D	E	L	V	T	R	.	.	G	W	N	N	I	T	V	L	D	Q	G	P	L	N	M	P	G	G	S	T	S	H	A	P	G	L	V	F	.	.	.	Q	T	N	P	S	K	T	M	A	S	F	A	K	Y	T	V	E	K	L	L	S	L	T	E	D	G
Template Known Secondary structure									S													T	.	.	T									S	S		T	T				S	G	G	G	G							.	.	.				S																					T	T
Template Predicted Secondary structure																							.	.																													.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.			.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.				.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.
Query SS confidence																																																							.	.	.
Query Sequence		G	I	R	Y	D	N	C	G	K	M	L	V	A	T	S	D	L	E	M	E	R	M	R	A	L	W	E	R	T	A	A	N	G	I	E	R	E	W	L	N	A	D	E	L	R	E	R	E	P	N	I	T	G	.	.	.	L	G	G	I	F	V	P	S	S	G	I	V	S	Y	R	D	V	T	A	A	M	A	K	I
Query Conservation																																																							.	.	.
Alig confidence																																																							.	.	.
Template Conservation
Template Sequence		V	S	C	F	N	Q	V	G	G	L	E	V	A	T	T	E	T	R	L	A	D	L	K	R	K	L	G	Y	A	A	A	W	G	I	E	G	R	L	L	S	P	A	E	C	Q	E	L	Y	P	L	L	D	G	E	N	I	L	G	G	L	H	V	P	S	D	G	L	A	S	A	A	R	A	V	Q	L	L	I	K	R
Template Known Secondary structure				S											S	S																		T																T	T	S		G	G	G								T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		F	Q	S	R	G	G	E	I	I	Y	N	A	E	V	S	G	L	N	E	H	K	N	G	V	V	I	R	T	R	Q	G	G	E	Y	E	A	S	T	L	I	S	C	S	G	L	M	A	D	R	L	V	K	M	L	G	L	E	P	G	F	I	I	C	P	F	R	G	E	Y	F	R	L	A	P	E	H	N	Q	I	.
Query Conservation																																																																																	.
Alig confidence																																																										.	.																						.
Template Conservation																																																										.	.
Template Sequence		T	E	S	A	G	V	T	Y	R	G	S	T	T	V	T	G	I	E	Q	S	G	G	R	V	T	G	V	Q	T	A	D	G	V	I	P	A	D	I	V	V	S	C	A	G	F	W	G	A	K	I	G	A	M	I	G	M	.	.	A	V	P	L	L	P	L	A	H	Q	Y	V	K	T	T	P	V	P	A	Q	Q	G
Template Known Secondary structure					T	T						S										T	T								T	T						S							G	G	G							T	T	T		.	.															S			G	G	G	T	T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
				237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	N	H	L	I	Y	P	I	P	D	P	A	M	P	F	L	G	V	H	L	T	R	M	I	D	G	S	V	T	V	G	P	N	A	V	L	A	F	K	R	E	G	Y	R	K	R	D	F	S	F	S	D	T	L	E	I	L	G	S	S	G	I	R	R	V	L	Q	N	H	L	R	S	G	L	G	E	M	K
Query Conservation		.	.
Alig confidence		.	.																																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	N	D	Q	P	N	G	A	R	L	P	I	L	R	H	Q	D	Q	D	L	Y	Y	R	E	H	G	D	R	Y	G	I	G	S	Y	A	H	R	P	M	P	V	D	V	D	T	L	G	A	Y	A	P	E	T	V	S	E	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	M	P	S	R	L	D	F
Template Known Secondary structure		T	S		T	T	T				S						G	G	G	T							T	T									S				B			G	G	G	S					G	G	G		B	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B	S	T	T
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.																.	.	.	.	300	.	.	.
		315	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		N	S	L	C	K	S	G	Y	L	R	L	V	Q	K	Y	C	P	R	L	S	L	S	D	L	Q	P	W	P	A	G	V	R	A	Q	A	V	S	P	D	G	K	L	I	D	D	F	L	F	V	T	T	P	R	T	I	H	T	C	N	A	P	S	P	A	A	T	S	A	I	P	I	G	A	H	I	V	S	K	V	.
Query Conservation																																																																																	.
Alig confidence																																			.	.													.													.	.	.																	.
Template Conservation																																			.	.													.													.	.	.
Template Sequence		T	L	E	D	F	L	P	A	W	E	A	T	K	Q	L	L	P	A	L	A	D	S	E	I	E	D	G	F	N	G	I	F	S	.	.	F	T	P	D	G	G	P	L	L	G	E	S	.	K	E	L	D	G	F	Y	V	A	E	A	V	.	.	.	W	V	T	H	S	A	G	V	A	K	A	M	A	E	L	L	T
Template Known Secondary structure																		G	G	G	G	G	S												.	.			T	T	S								.	S	S	S	B	T						S		.	.	.		G	G	G
Template Predicted Secondary structure																																			.	.													.													.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.			.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360				.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
					394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	Q	T	L	L	A	S	Q	S	N	P	G	R	T	L	R	A	A
Query Conservation		.	.	.
Alig confidence		.	.	.
Template Conservation
Template Sequence		T	G	R	S	E	T	D	L	G	E	C	D	I	T	R	F	E	D	V	Q
Template Known Secondary structure			S	S		S	S			T	T	T	B	G	G	G	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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