Job Description P37339 Confidence 99.52% Date Thu Jan 5 11:55:20 GMT 2012 Rank 92 Aligned Residues 392 % Identity 9% Template c1coyA_ PDB info PDB header:oxidoreductase(oxygen receptor) Chain: A: PDB Molecule:cholesterol oxidase; PDBTitle: crystal structure of cholesterol oxidase complexed with a2 steroid substrate. implications for fad dependent alcohol3 oxidases Resolution 1.80 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	F	V	I	I	G	G	G	I	I	G	M	S	T	A	M	Q	L	I	D	V	Y	P	D	A	R	I	A	L	L	E	K	E	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		V	P	A	L	V	I	G	S	G	Y	G	G	A	V	A	A	L	R	L	T	Q	A	.	.	G	I	P	T	Q	I	V	E	M	G	R	S	W	D	T	P	G	S	D	G	K	I	F	C	G	M	L	N	P	D	K	R	S	M	W	L	A	D	K	T	D	Q	P	V	S	N	F	M	G	F	G	I	N	K	S	I
Template Known Secondary structure										S													T	.	.	T								S	S			S		S			T	T	S		S	S			S	S	S			T	T	S	B	B	S		S	B				S	S		S	B	T	T	B	S				B
Template Predicted Secondary structure																								.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
																								38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.					.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	C	H	Q	T	G	H	N	S	G	V	I	H	A	G	V	Y	.	.	.	.	Y	T	P	G	S	L	K	A	Q	F	C	L	A	G	N	R	A	T	K	A	F	C	D	Q	N	G	I	R	Y	D	N	C	G	K	M	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation
Template Sequence		D	R	Y	V	G	V	L	D	S	E	R	F	S	G	I	K	V	Y	Q	G	R	G	V	G	G	G	S	L	V	N	G	G	M	A	V	T	P	K	R	N	Y	F	E	E	I	L	P	S	V	D	S	N	E	M	Y	N	K	Y	F	P	R	A	N	T	G	L	G	V	N	N	I	D	Q	A	W	F	E	S	T	E
Template Known Secondary structure					B		S							S	S								S	T	T	G	G	G	G	T	S			B														T	T	S								T										T		B											G
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.		.	.	.	.	.	.	170
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		V	A	T	S	D	L	E	M	E	R	M	R	A	L	W	E	R	T	A	A	N	G	I	E	R	E	W	L	N	A	D	E	L	R	E	R	E	P	N	I	T	G	L	G	G	I	F	V	P	S	S	G	I	V	S	Y	R	D	V	T	A	A	M	A	K	I	F	Q	S	R	G	G	.	E	I	I	Y	N	A	E
Query Conservation																																																																										.
Alig confidence																																																																										.
Template Conservation
Template Sequence		W	Y	K	F	A	R	T	G	R	K	T	A	Q	R	S	G	F	T	T	A	F	V	P	N	V	Y	D	F	E	Y	M	K	K	E	A	A	G	Q	V	T	K	S	G	L	G	G	E	V	I	Y	G	N	N	A	G	K	K	S	L	D	K	T	Y	L	A	Q	A	A	A	T	G	K	L	T	I	T	T	L	H	R
Template Known Secondary structure		G	G													T	T								B	S	B										T	T		S			S	T	T	T	T		S	T	T			S	S	S	B			T	T	T	T								T	T							S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.											.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																			.																			.
Query SS confidence																.	.	.	.	.	.	.	.	.	.																			.																			.
Query Sequence		V	S	G	L	N	E	H	K	N	G	V	V	I	R	.	.	.	.	.	.	.	.	.	.	T	R	Q	G	G	E	Y	E	A	S	T	L	I	S	C	S	G	L	.	M	A	D	R	L	V	K	M	L	G	L	E	P	G	F	I	I	C	.	P	F	R	G	E	Y	F	R	L	A	P	E	H	N	Q	I	V	N
Query Conservation																.	.	.	.	.	.	.	.	.	.																			.																			.
Alig confidence																.	.	.	.	.	.	.	.	.	.																			.																			.
Template Conservation
Template Sequence		V	T	K	V	A	P	A	T	G	S	G	Y	S	V	T	M	E	Q	I	D	E	Q	G	N	V	V	A	T	K	V	V	T	A	D	R	V	F	F	A	A	G	S	V	G	T	S	K	L	L	V	S	M	K	A	Q	G	H	L	P	N	L	S	S	Q	V	G	E	G	W	G	N	N	G	N	I	M	V	G	R	A
Template Known Secondary structure									S	S	S	S										T	T	S																	S															T	T	S	S	T	T	S		T	T	T	T			B	B		T	T
Template Predicted Secondary structure
Template SS confidence
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		H	L	I	Y	P	I	P	D	P	A	M	P	F	L	G	V	H	L	T	R	M	.	.	.	I	D	G	S	V	T	V	G	P	N	A	V	L	A	F	K	R	E	G	Y	R	K	R	D	F	S	F	S	D	T	L	E	I	L	G	S	S	G	I	R	R	V	L	Q	N	H	L	R	S	G	L	G	E	M	K	N
Query Conservation																							.	.	.
Alig confidence																							.	.	.
Template Conservation
Template Sequence		N	H	M	W	D	A	T	G	S	K	Q	A	T	I	P	T	M	G	I	D	N	W	A	D	P	T	A	P	I	F	A	E	I	A	P	L	P	A	G	L	E	T	Y	V	S	L	Y	L	A	I	T	K	N	P	E	R	A	R	F	Q	F	N	S	G	T	G	K	V	D	L	T	W	A	Q	S	Q	N	Q	K	G
Template Known Secondary structure				T	T	S				S				S	S								T	T		T	T	S												S	S																	B						T	T	T	T								G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.							.	.	.	.	370	.								.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.							.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.							.	.	.	.	.	.	.
Query Sequence		S	L	C	K	S	G	Y	L	R	L	V	Q	K	Y	C	P	R	L	S	L	S	D	L	Q	P	W	P	A	G	V	R	A	Q	A	V	S	P	D	G	K	L	I	D	D	F	L	F	V	T	T	.	.	.	.	.	.	P	R	T	I	H	T	.	.	.	.	.	.	.	C	N	A	P	S	P	A	A	T	S	A
Query Conservation																																																				.	.	.	.	.	.							.	.	.	.	.	.	.
Alig confidence																																																				.	.	.	.	.	.							.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	D	M	A	K	K	V	F	D	K	I	N	Q	K	E	G	T	I	Y	R	T	D	L	F	Y	Y	K	T	W	G	D	D	F	T	Y	H	P	L	G	G	V	L	L	N	K	A	T	D	N	F	G	R	L	P	E	Y	P	G	L	Y	V	V	D	G	S	L	V	P	G	N	V	G	V	N	P	F	V	T	I	T
Template Known Secondary structure																	T			B		S	S						S	S	B		S			S			B		S	S		T	T	T	T	S		T	T	S	B		T	T	S	T	T					S	G	G	G	S		S			S	S		S
Template Predicted Secondary structure
Template SS confidence
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.
		383	.	.	.	.	.	.	390	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	I	G	A	H	I	V	S	K	V	Q	T	L
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	A	L	A	E	R	N	M	D	K	I	I	S	S
Template Known Secondary structure		.
Template Predicted Secondary structure		.
Template SS confidence
			492	.	.	.	.	.	.	.	500	.	.	.	.