Job Description P37339 Confidence 99.26% Date Thu Jan 5 11:55:20 GMT 2012 Rank 168 Aligned Residues 203 % Identity 17% Template c1cf3A_ PDB info PDB header:oxidoreductase(flavoprotein) Chain: A: PDB Molecule:protein (glucose oxidase); PDBTitle: glucose oxidase from apergillus niger Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	F	V	I	I	G	G	G	I	I	G	M	S	T	A	M	Q	L	I	D	V	Y	P	D	.	A	R	I	A	L	L	E	K	E	S	A	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																								.	.
Template Sequence		V	D	Y	I	I	A	G	G	G	L	T	G	L	T	T	A	A	R	L	T	E	N	.	.	P	N	I	S	V	L	V	I	E	S	G	S	Y	E	S	D	R	G	P	I	I	E	D	L	N	A	Y	G	D	I	F	G	S	S	V	D	H	A	Y	E	T	V	E	L	A	T	N	N	Q	T	A	L	I	R	S	G
Template Known Secondary structure										S											T	T	S	.	.	T	T								S	S				T	T	S						B	G	G	G	T	T	T	T	T	T	S	T	T	B									T	T	T	S								B
Template Predicted Secondary structure																								.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.											.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure		.	.	.																													.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.																													.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	C	H	Q	T	G	H	N	S	G	V	I	H	A	G	V	Y	Y	T	P	G	S	L	K	A	Q	F	C	L	.	.	.	.	.	.	.	.	.	.	A	G	N	R	A	T	K	A	F	C	D	Q	N	G	I	R	Y	D	N	C	G	K	M	L	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.																													.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.												.	.	.	.														.	.	.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		N	G	L	G	G	S	T	L	V	N	G	G	T	W	.	.	.	.	T	R	P	H	K	A	Q	V	D	S	W	E	T	V	F	G	N	E	G	W	N	W	D	N	V	A	A	Y	S	L	Q	A	E	R	A	R	A	P	N	A	K	Q	I	A	A	G	H	Y	F	N	A	S	C	H	G	V	N	G	T	V	H	A
Template Known Secondary structure			S	T	T	G	G	G	G	T	S			B		.	.	.	.														T	T			T	T		S																									T					G	G	G	S		S	S	S	S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
						94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.
Query SS confidence		.	.	.	.
Query Sequence		.	.	.	.	T	S	D	L	E	M	E	R	M	R	A	L	W	E	R	T	A	A	N	G	I	E	R	E	W	L	N	A	D	E	L	R	E	R	E	P	N	I	T	G	L	G	G	I	F	V	P	S	S	G	I	V	S	Y	R	D	V	T	A	A	M	A	K	I	F	Q	S	R	G	G	E	I	I	Y	N	A
Query Conservation		.	.	.	.
Alig confidence		.	.	.	.																														.	.	.																											.	.
Template Conservation																																			.	.	.																											.	.
Template Sequence		G	P	R	D	T	G	D	D	Y	S	P	I	V	K	A	L	M	S	A	V	E	D	R	G	V	P	T	K	K	D	F	G	C	.	.	.	G	D	P	H	G	V	S	M	F	P	N	T	L	H	E	D	Q	V	R	S	D	A	A	R	E	W	.	.	L	L	P	N	Y	Q	R	P	N	L	Q	V	L	T	G	Q
Template Known Secondary structure		B					S	S		B		T											T	T	T			B				T	T	S	.	.	.	S										B	S	B		T	T		B	B								.	.	T	G	G	G	T	T		T	T						S
Template Predicted Secondary structure																																			.	.	.																											.	.
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
		170	.	.	.	.	.	.	.	.	.								180	.	.	.	.	.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.		.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.												.	.	.													.
Query SS confidence												.	.	.	.	.	.	.												.	.	.													.
Query Sequence		E	V	S	G	L	N	E	H	K	N	.	.	.	.	.	.	.	G	V	V	I	R	T	R	Q	G	G	E	.	.	.	Y	E	A	S	T	L	I	S	C	S	G	L	.	M	A	D	R	L	V	K	M	L	G	L	E	P
Query Conservation												.	.	.	.	.	.	.												.	.	.													.
Alig confidence												.	.	.	.	.	.	.												.	.	.													.
Template Conservation
Template Sequence		Y	V	G	K	V	L	L	S	Q	N	G	T	T	P	R	A	V	G	V	E	F	G	T	H	K	G	N	T	H	N	V	Y	A	K	H	E	V	L	L	A	A	G	S	A	V	S	P	T	I	L	E	Y	S	G	I	G	M
Template Known Secondary structure											S	S	S	S												T	T															S		T	T	T								T	T	B	S
Template Predicted Secondary structure
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions