Job Description P37339 Confidence 100.00% Date Thu Jan 5 11:55:20 GMT 2012 Rank 19 Aligned Residues 321 % Identity 14% Template c1c0iA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:d-amino acid oxidase; PDBTitle: crystal structure of d-amino acid oxidase in complex with2 two anthranylate molecules Resolution 1.90 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.
Query SS confidence																																																															.	.
Query Sequence		Y	D	F	V	I	I	G	G	G	I	I	G	M	S	T	A	M	Q	L	I	D	V	Y	P	D	A	R	I	A	L	L	E	K	E	S	A	P	A	C	H	Q	T	G	H	N	S	G	V	I	H	A	G	V	Y	Y	T	P	G	S	L	K	.	.	A	Q	F	C	L	A	G	N	R	A	T	K	A	F	C	D	Q
Query Conservation																																																															.	.
Alig confidence																								.	.											.																											.	.
Template Conservation																								.	.											.
Template Sequence		K	R	V	V	V	L	G	S	G	V	I	G	L	S	S	A	L	I	L	A	R	K	.	.	G	Y	S	V	H	I	L	A	R	D	.	L	P	E	D	V	S	S	Q	T	F	A	S	P	W	A	G	A	N	W	T	P	F	M	T	L	T	D	G	P	R	Q	A	K	W	E	E	S	T	F	K	K	W	V	E	L
Template Known Secondary structure										S													T	.	.	T								S	S	.		T	T		T	T		T	T	S	S	G	G	G				B					S		T	T	T
Template Predicted Secondary structure																								.	.											.
Template SS confidence
		1005	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.			.	.	.	1030	.	.	.	.	.	.		.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.
		80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		N	G	I	R	.	.	Y	D	N	C	G	K	M	L	V	A	T	S	D	L	E	M	E	R	M	R	A	L	W	E	R	T	A	A	N	G	I	E	R	E	W	L	N	A	D	E	L	R	E	R	E	P	N	I	T	G	L	G	G	I	F	V	P	S	S	G	I	V	S	Y	R	D	V	T	A	A	M	A	K	I
Query Conservation						.	.
Alig confidence						.	.																			.	.	.	.	.																		.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.																		.	.	.	.	.	.	.
Template Sequence		V	P	T	G	H	A	M	W	L	K	G	T	R	R	F	A	Q	N	E	D	G	L	L	G	.	.	.	.	.	H	W	Y	K	D	I	T	P	N	Y	R	P	L	P	S	S	E	.	.	.	.	.	.	.	C	P	P	G	A	I	G	V	T	Y	D	T	L	S	V	H	A	P	K	Y	C	Q	Y	L	A	R	E
Template Known Secondary structure		T	T	T	T	S	S											S	S	G	G	G	G	G	G	.	.	.	.	.	G	T	T	T	T	T	S	T	T						G	G	G	.	.	.	.	.	.	.	S		T	T
Template Predicted Secondary structure																										.	.	.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		1082	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.						.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.								.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Q	S	R	G	G	E	I	I	Y	N	A	E	V	S	G	L	N	E	H	K	N	G	V	V	I	R	T	R	Q	G	G	E	Y	E	A	S	T	L	I	S	C	S	G	L	M	A	D	R	L	V	K	M	L	G	L	E	P	G	F	I	I	C	P	F	R	G	E	Y	F	R	L	A	P	E	H	N	Q	I	V
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.																						.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.																						.
Template Sequence		L	Q	K	L	G	A	T	F	E	R	R	T	V	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	Q	A	F	D	G	A	D	L	V	V	N	A	T	G	L	G	A	K	S	I	A	G	I	D	.	.	.	.	D	Q	A	A	E	P	I	R	G	Q	T	V	L	V	K	S	P	C	K	R	C	.
Template Known Secondary structure					T	T									S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T		S	S		S							G	G	G	G	G	T	S	B	T	T		.	.	.	.		T	T																			.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.																						.
Template SS confidence
		1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.														.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190					.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	L	I	Y	P	I	P	D	P	A	M	P	F	L	G	V	H	L	T	R	M	I	D	G	S	V	T	V	G	P	N	A	V	L	A	F	K	R	E	G	Y	R	K	R	D	F	S	F	S	D	T	L	E	I	L	G	S	S	G	I	R	R	V	L	Q	N	H	L	R	S	G	L	G	E	M	K	N	S	L
Query Conservation
Alig confidence		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	M	D	S	S	D	P	A	S	P	A	Y	I	I	P	R	P	G	G	E	V	I	C	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	V	G	D	W	D	L	S	V	N	P	E
Template Known Secondary structure		.	.	.	.	.	.					S		T	T									T	T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T					S
Template Predicted Secondary structure		.	.	.	.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								1212	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.																																				.	.	1240	.	.	.	.	.	.	.	.	.	1250
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.							.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.																						.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure																	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	K	S	G	Y	L	R	L	V	Q	K	Y	C	P	R	.	.	.	.	.	.	L	S	L	S	D	L	Q	P	W	P	A	G	V	R	A	Q	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	G	K	L	I	D	D	F	L	F	V	T	T	P	R	T	I	H
Query Conservation																	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																																									.
Template Sequence		T	V	Q	R	I	L	K	H	C	L	R	L	D	P	T	I	S	S	D	G	T	I	E	G	I	E	V	L	R	H	N	V	G	L	R	P	A	R	R	G	G	P	R	V	E	A	E	R	I	V	L	P	L	D	R	T	K	S	P	L	S	L	G	R	G	S	A	R	A	A	K	.	E	K	E	V	T	L	V	H
Template Known Secondary structure															G	G	G	S	S	S	S	S	G	G	G															T	T	S											S			T	T	T		T	T		S	S		S					S		.
Template Predicted Secondary structure																																																																									.
Template SS confidence
		1251	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.		.	.	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	N	A	P	S	P	A	A	T	S	A	I	P	I	G	A	H	I	V	S	K	V	Q	T	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	G	F	S	S	A	G	Y	Q	Q	S	W	G	A	A	E	D	V	A	Q	L	V	D	E	A	F
Template Known Secondary structure						G	G	G
Template Predicted Secondary structure
Template SS confidence
		1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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