Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6A3
Confidence98.66%DateThu Jan 5 11:02:41 GMT 2012
Rank14Aligned Residues133
% Identity18%Templated2aa4a2
SCOP infoRibonuclease H-like motif Actin-like ATPase domain ROK
Resolution2.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   205....210.........220.........230.........240 .........250.........260.........270.........280
Predicted Secondary structure 

















....















Query SS confidence 



































. . . .







































Query Sequence  NIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEGLVM. . . . GTRSGDIDPAIIFHLHDTLGMSVDAINKLLTKESGLLGLT
Query Conservation    





 
 

 

  








 





 
....




 


  
  
      
  
    
   




 
Alig confidence 



































....















.....













.....
Template Conservation 
   
 

 


 


  
    
  
 


 

            
     
   .....
             .....
Template Sequence  DMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPVCGCGRTGCVEAIA. . . . . SGRGIAAAAQGELA. . . . .
Template Known Secondary structure 
SSSTT

TTS



GGGSBS
TTS
B
TTS
BSB.....ST

GGGT.....
Template Predicted Secondary structure 




























.....





.....
Template SS confidence 















































































   123......130.........140.........150.........160.........170........ .180.........190..
 
   281........290.. .......300.........310.........320.........330.........340.........350..
Predicted Secondary structure 



.


















Query SS confidence 











.



























































Query Sequence  EVTSDCRYVEDN. YATKEDAKRAMDVYCHRLAKYIGAYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVL
Query Conservation 
 
 
 
 
   .  

  
 

 
 
 


 
 


  
 
 
 













  

  
   
  
Alig confidence  ..









.





























..
















.









Template Conservation  ..      
      

  
   
      

  
 

   
 ..
  




 
       .  
   
   
Template Sequence  . . GADAKTIFTRAGQGDEQAQQLIHRSARTLARLIADIKATTD. . CQCVVVGGSVGLAEGYL. ALVETYLAQE
Template Known Secondary structure  ..T

TT

..
STSTT.TTS
Template Predicted Secondary structure  ..






..







.
Template SS confidence 








































































   193......200.........210.........220.........230... ......240.........250 .........260
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions