Job Description P0A6A3 Confidence 37.13% Date Thu Jan 5 11:02:41 GMT 2012 Rank 106 Aligned Residues 134 % Identity 21% Template c3cqyA_ PDB info PDB header:transferase Chain: A: PDB Molecule:anhydro-n-acetylmuramic acid kinase; PDBTitle: crystal structure of a functionally unknown protein (so_1313) from2 shewanella oneidensis mr-1 Resolution 2.30 Å

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		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.				.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.													.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure																				.				.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query SS confidence																				.				.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Query Sequence		E	L	N	I	I	T	C	H	L	G	N	G	G	S	V	S	A	I	.	R	N	G	.	.	.	K	C	V	D	T	S	M	G	L	T	P	L	E	G	L	V	M	G	T	.	.	.	.	.	.	.	.	.	.	.	.	R	S	G	D	I	D	P	A	I	I	F	H	L	H	D	T	.	.	.	.	.	.	.	.
Query Conservation																				.				.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Alig confidence																				.				.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	K	K	R	V	I	L	N	I	G	G	I	A	N	I	T	Y	L	P	G	N	S	E	E	V	L	G	F	D	T	G	P	G	N	T	L	I	D	A	W	V	Q	Q	V	K	N	E	S	Y	D	K	N	G	A	W	A	A	S	G	K	T	D	P	Q	L	L	A	Q	L	L	S	H	P	Y	F	S	L	A	Y	P
Template Known Secondary structure		T									S	S									S	S	S	S										S	S														S	S		G	G	G						S												T		G	G	G	G	S		S	S
Template Predicted Secondary structure
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
							259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	L	G	M	S	V	D	A	I	N	K	L	L	T	K	E	S	G	L	L	G	L	T	E	V	T	S	D	C	R	Y	V	E	D	N	Y	A	T	K	E	D	A	K	R	A	M	D	V	Y	C	H	R	L	A	K	Y	I	G	A	Y	T	A	L	M	D	G	R	L	D	A	V	V	F	T	G	G
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template Sequence		K	S	T	G	R	E	L	F	N	Q	A	W	L	E	Q	Q	L	S	A	F	N	Q	L	N	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	I	Q	S	T	L	L	D	L	T	C	H	S	I	A	Q	D	I	L	K	L	.	.	.	.	.	A	Q	E	G	E	L	F	V	C	G	G
Template Known Secondary structure						S	S	S	S	S								T	T	T		T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.		S	S							S	G
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.																		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.						.	.	.	290	.	.	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	E	N	A	A	M	V	R	E	L	S	L	G	K	L	G	V	L	G	F	E	V	D	H	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	G	A	F	N	A	E	L	X	Q	R	L	A	A	L	L	P	G	Y	R	I	D	T	T	S	A
Template Known Secondary structure		.	G	G	G													T	T						G	G	G
Template Predicted Secondary structure		.
Template SS confidence
			298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions