Phyre 2 alignment of P0A6A3 with c2aa4B

Job Description P0A6A3
Confidence 98.11% Date Thu Jan 5 11:02:41 GMT 2012

Rank 22 Aligned Residues 258

% Identity 15% Template c2aa4B_

PDB info PDB header:transferase Chain: B: PDB Molecule:putative n-acetylmannosamine kinase; PDBTitle: crystal structure of escherichia coli putative n-2 acetylmannosamine kinase, new york structural genomics3 consortium

Resolution 2.20 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence	M	S	S	K	L	V	L	V	L	N	C	G	S	S	S	L	K	F	A	I	I	D	A	V	N	G	E	E	Y	L	S	G	L	A	E	C	F	H	L	P	E	A	R	I	K	W	K	M	D	G	N	K	Q	E	A	A	L	G	A	G	A	A	H	S	E	A	L	N	F	I	V	N	T	I	L	A	Q	K	P	E
Query Conservation
Alig confidence			.	.	.																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	M	T	.	.	.	T	L	A	I	D	I	G	G	T	K	L	A	A	A	L	I	G	.	A	D	G	Q	I	R	D	R	R	E	L	P	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	S	Q	T	P	E	A	L	R	D	A	L	S	A	L	V	S	P	L	Q	A	H
Template Known Secondary structure			.	.	.								S	S									.	T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S																			T	T
Template Predicted Secondary structure			.	.	.																		.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	1	.				.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.		20	.	.	.	.	.	.	.	.	.	30	.	.																						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.

	81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence	L	S	A	Q	L	T	A	I	G	H	R	I	V	H	G	G	E	K	Y	T	S	S	V	V	I	D	E	S	V	I	Q	G	I	K	D	A	A	S	F	A	P	L	H	N	P	A	H	L	I	G	I	E	E	A	L	K	S	F	P	Q	L	K	D	K	N	V	A	V	F	D	T	A	F	H	Q	T	M	P	E	E
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence	A	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	V	A	I	A	S	T	G	I	I	R	D	G	S	L	L	A	L	N	P	H	N	L
Template Known Secondary structure		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S				T	T					S	S	G	G	G	G
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	56	.																																																								.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80

	161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence	S	Y	L	Y	A	L	P	Y	N	L	Y	K	E	H	G	I	R	R	Y	G	A	.	H	G	T	S	H	F	Y	V	T	Q	E	A	A	K	M	L	N	K	P	V	E	E	L	N	I	I	T	C	H	L	G	N	G	G	S	V	S	A	I	R	N	G	K	C	V	D	T	S	M	G	L	T	P	L	E	G	L	V
Query Conservation																						.
Alig confidence														.	.	.						.
Template Conservation														.	.	.
Template Sequence	G	G	L	L	H	F	P	L	V	K	T	L	E	.	.	.	Q	L	T	N	L	P	T	I	A	I	N	D	A	Q	A	A	A	W	A	E	F	Q	A	L	D	G	D	I	T	D	M	V	F	I	T	V	S	T	G	V	G	G	G	V	V	S	G	C	K	L	L	T	G	P	G	G	L	A	G	H	I	G	H	T
Template Known Secondary structure	T	T		T	T									.	.	.					S																		T	S		T	T										S	S	S								T	T						T	T	S		T	T		G	G	G	S
Template Predicted Secondary structure														.	.	.
Template SS confidence
	81	.	.	.	.	.	.	.	.	90	.	.	.				.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.
Query SS confidence																																																						.
Query Sequence	M	G	T	R	S	G	D	I	D	P	A	I	I	F	H	L	H	D	T	L	G	M	S	V	D	A	I	N	K	L	L	T	K	E	S	G	L	L	G	L	T	E	V	T	S	D	C	R	Y	V	E	D	N	.	Y	A	T	K	E	D	A	K	R	A	M	D	V	Y	C	H	R	L	A	K	Y	I	G	A	Y	T
Query Conservation																																																						.
Alig confidence																					.																.	.	.	.	.	.	.											.
Template Conservation																					.																.	.	.	.	.	.	.
Template Sequence	L	A	D	P	H	G	P	V	C	G	C	G	R	T	G	C	V	E	A	I	.	A	S	G	R	G	I	A	A	A	A	Q	G	E	L	A	.	.	.	.	.	.	.	G	A	D	A	K	T	I	F	T	R	A	G	Q	G	D	E	Q	A	Q	Q	L	I	H	R	S	A	R	T	L	A	R	L	I	A	D	I	K
Template Known Secondary structure	B	S		T	T	S		B		T	T	S		B	S	B					.		S							T			G	G	G	T	.	.	.	.	.	.	.	T												T	T
Template Predicted Secondary structure																					.																.	.	.	.	.	.	.
Template SS confidence
	158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.								.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.

	319	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	L	M	D	G	R	L	D	A	V	V	F	T	G	G	I	G	E	N	A	A	M	V	R	E	L	S	L	G	K	L	G	V	L
Query Conservation
Alig confidence					.	.												.
Template Conservation					.	.												.
Template Sequence	A	T	T	D	.	.	C	Q	C	V	V	V	G	G	S	V	G	.	L	A	E	G	Y	L	A	L	V	E	T	Y	L	A	Q	E
Template Known Secondary structure					.	.		S										.	T	S	T	T										T	T	S
Template Predicted Secondary structure					.	.												.
Template SS confidence
	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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