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Job DescriptionP0A6A3
Confidence100.00%DateThu Jan 5 11:02:41 GMT 2012
Rank3Aligned Residues387
% Identity42%Templatec1x3nA_
PDB info PDB header:transferaseChain: A: PDB Molecule:propionate kinase; PDBTitle: crystal structure of amppnp bound propionate kinase (tdcd) from2 salmonella typhimurium
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  KLVLVLNCGSSSLKFAIIDAVNGEEYLSGLAECFHLPEARIKWKMDGNKQEAALGAGAAHSEALNFIVNTILAQKPELSA
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Template Sequence  PVVLVINCGSSSIKFSVLDVATCDVLMAGIADGMNTENAFLSI. . . . NGDKPINLAHSNYEDALKAIAFELEKRDL. . TD
Template Known Secondary structure 

SSTTT

STTSSS

S....TTS


SS

TTT
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   5....10.........20.........30.........40....... ..50.........60.........70...... ..
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  QLTAIGHRIVHGGEKYTSSVVIDESVIQGIKDAASFAPLHNPAHLIGIEEALKSFPQLKDKNVAVFDTAFHQTMPEESYL
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Template Sequence  SVALIGHRIAHGGELFTQSVIITDEIIDNIRRVSPLAPLHNYANLSGIDAARHLFPAV. . RQVAVFDTSFHQTLAPEAYL
Template Known Secondary structure  TS

TTT
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GGGS
TTS..TTGGGGG


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   7980.........90.........100.........110.........120.........130...... ...140.........150......
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  YALPYNLYKEHGIRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEGLVMGTR
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Template Sequence  YGLPWEYFSSLGVRRYGFHGTSHRYVSRRAYELLDLDEKDSGLIVAHLGNGASICAVRNGQSVDTSMGMTPLEGLMMGTR
Template Known Secondary structure 
SS
TT





S
TT
BTTB
SSSTTS

SSTTSSS

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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   244.....250.........260.........270.........280.........290.. .......300.........310.........320..
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Query Sequence  SGDIDPAIIFHLHDTLGMSVDAINKLLTKESGLLGLTEVTSDCRYVEDN. YATKEDAKRAMDVYCHRLAKYIGAYTALMD
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Template Sequence  SGDVDFGAMAWIAKETGQTLSDLERVVNKESGLLGISGLSSDLRVLEKAWHEGHERARLAIKTFVHRIARHIAGHAASLH
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S

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S
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   237..240.........250.........260.........270.........280.........290.........300.........310......
 
   323......330.........340.........350.........360.. .......370.........380.........390.........
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Query Sequence  GRLDAVVFTGGIGENAAMVRELSLGKLGVLGFEVDHERNL. AARFGKSGFINKEGTRPAVVIPTNEELVIAQDASRLT
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Template Sequence  R. LDGIIFTGGIGENSVLIRQLVIEHLGVLGLTLDVEMNKQPNSHGERIISANPSQVICAVIPTNEEKMIALDAIHLG
Template Known Secondary structure  S.


TTGGGT

B
S
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   317 ..320.........330.........340.........350.........360.........370.........380.........390...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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