Job Description P0ACN7 Confidence 97.66% Date Thu Jan 5 11:18:37 GMT 2012 Rank 86 Aligned Residues 193 % Identity 12% Template d3ckma1 SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 1.35

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		70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.			.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure												.	.																																																		.	.
Query SS confidence												.	.																																																		.	.
Query Sequence		I	L	V	I	V	P	D	I	C	D	.	.	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	Y	L	V	L	I	G	D	C	A	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	T	K	Q	I	D	G	M	L	.	.	L	L	G	S	R	L	P	F	D	A	S	I	E	E	Q	R	N
Query Conservation												.	.																																																		.	.
Alig confidence												.	.																																		.	.															.	.
Template Conservation																																															.	.
Template Sequence		I	G	L	L	L	P	L	S	G	D	G	Q	I	L	G	T	T	I	Q	S	G	F	N	D	A	K	G	N	S	T	I	P	V	Q	V	F	D	T	S	X	N	S	V	Q	D	.	.	I	I	A	Q	A	K	Q	A	G	I	K	T	L	V	G	P	L	L	K	Q	N	L	D	V	I	L	A	D	P	A	Q	I	Q
Template Known Secondary structure									S	S	T	T																T	T			S							T	T	T	S					.	.								T	T									S											G	G	G	G	T
Template Predicted Secondary structure																																															.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																					.	.	.
Query SS confidence																					.	.	.
Query Sequence		L	P	P	M	V	M	A	N	E	F	A	P	E	L	E	L	P	T	V	.	.	.	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	G	H	K	R	I	G	C	I	A	G	P	E	E	M	P	L	C	H	Y	R	L	Q	G	Y	V	Q	A	L	R	R	C	G	I	M	V	D	P	Q	Y	I
Query Conservation																					.	.	.
Alig confidence																					.	.	.																												.	.
Template Conservation																																																			.	.
Template Sequence		G	X	D	V	L	A	L	N	A	T	P	N	S	R	A	I	P	Q	L	C	Y	Y	G	L	S	P	E	D	E	A	E	S	A	A	N	K	X	W	N	D	G	V	R	N	P	L	V	A	X	.	.	P	Q	N	D	L	G	Q	R	V	G	N	A	F	N	V	R	W	Q	Q	L	A	G	T	D	A	N	I	R	Y
Template Known Secondary structure		T						S				T	T					T	T																						T	T			S						.	.		S	S																			S	S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.			.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																		.
Query SS confidence																																		.
Query Sequence		A	R	G	D	F	T	F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	Q	P	P	T	A	V	F	C	H	S	D	.	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P
Query Conservation																																		.
Alig confidence																.	.	.	.	.	.													.
Template Conservation																.	.	.	.	.	.
Template Sequence		Y	N	L	P	A	D	V	T	Y	F	V	Q	E	N	.	.	.	.	.	.	N	S	N	T	T	A	L	Y	A	V	A	S	P	T	E	L	A	E	X	K	G	Y	L	T	N	I	V	P	N	L	A
Template Known Secondary structure			S	S	T	T									S	.	.	.	.	.	.		T	T																					T	T	T		T	T
Template Predicted Secondary structure																.	.	.	.	.	.
Template SS confidence
		415	.	.	.	.	420	.	.	.	.	.	.	.	.							.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions