Job Description P0ACN7 Confidence 94.69% Date Thu Jan 5 11:18:37 GMT 2012 Rank 153 Aligned Residues 210 % Identity 16% Template d1jdpa_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.00

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		66	.	.	.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.										.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.				.	.	.	.	.	.		.	130
Predicted Secondary structure												.	.																							.	.	.	.	.	.	.	.	.																										.	.	.							.
Query SS confidence												.	.																							.	.	.	.	.	.	.	.	.																										.	.	.							.
Query Sequence		E	S	R	T	I	L	V	I	V	P	.	.	D	I	C	D	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	.	.	.	.	.	.	.	.	.	Y	L	V	L	I	G	D	C	A	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	T	K	.	.	.	Q	I	D	G	M	L	.	L	L
Query Conservation												.	.																							.	.	.	.	.	.	.	.	.																										.	.	.							.
Alig confidence												.	.																							.	.	.	.	.	.	.	.	.																										.	.	.							.
Template Conservation
Template Sequence		Q	K	I	E	V	L	V	L	L	P	Q	D	D	S	Y	L	F	S	L	T	R	V	R	P	A	I	E	Y	A	L	R	S	V	E	G	R	L	L	P	P	G	T	R	F	Q	V	A	Y	E	D	S	D	C	G	N	R	A	L	F	S	L	V	D	R	V	A	A	A	R	G	A	K	P	D	L	I	L	G	P	V
Template Known Secondary structure												S	S	T	T	S	T	T																					S		T	T											T	T	S	T													T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.									.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.		.	.	.	200	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.																																													.
Query SS confidence																								.	.	.	.	.	.	.	.																																													.
Query Sequence		G	S	R	L	P	F	D	A	S	I	E	E	Q	R	N	L	P	P	M	V	M	A	.	.	.	.	.	.	.	.	N	E	F	A	P	E	L	E	L	P	T	V	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	G	H	K	R	I	G	C	I	A	G	P	E	E	M	.	P	L	C	H	Y
Query Conservation																								.	.	.	.	.	.	.	.																																													.
Alig confidence																								.	.	.	.	.	.	.	.																																													.
Template Conservation
Template Sequence		C	E	Y	A	A	A	P	V	A	R	L	A	S	H	W	D	L	P	M	L	S	A	G	A	L	A	A	G	F	Q	H	K	D	S	E	Y	S	H	L	T	R	V	A	P	A	Y	A	K	M	G	E	M	M	L	A	L	F	R	H	H	H	W	S	R	A	A	L	V	Y	S	D	D	K	L	E	R	N	C	Y	F
Template Known Secondary structure		S															T						S				S	G	G	G	G		T	T	T	T	T	T	T					S																		T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	Q	G	Y	V	Q	A	L	R	R	C	G	I	M	V	D	P	Q	Y	I	A	R	G	D	F	T	F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	Q	P	P	T	A	V	F	C	H	S	D	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P	E	D	L	S	I	I	G
Query Conservation
Alig confidence																																									.	.	.	.
Template Conservation																																									.	.	.	.
Template Sequence		T	L	E	G	V	H	E	V	F	Q	E	E	G	L	H	T	S	I	Y	S	F	D	E	T	K	D	L	D	L	E	D	I	V	R	N	I	Q	A	S	.	.	.	.	E	R	V	V	I	M	C	A	S	S	D	T	I	R	S	I	M	L	V	A	H	R	H	G	M	T	S	G	D	Y	A	F	F	N	I
Template Known Secondary structure														T										T	T	S															.	.	.	.		S						S															T	T		T	T	T	T
Template Predicted Secondary structure																																									.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.					210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions