Job Description P0ACN7 Confidence 100.00% Date Thu Jan 5 11:18:37 GMT 2012 Rank 46 Aligned Residues 270 % Identity 17% Template d1guda_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 1.7

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.			.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																							.	.																													.	.
Query SS confidence																																							.	.																													.	.
Query Sequence		S	R	T	I	L	V	I	V	P	D	I	C	D	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	Y	L	V	L	I	G	.	.	D	C	A	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	T	K	Q	I	D	G	M	L	L	L	G	.	.	S	R	L	P	F	D	A	S	I	E	E
Query Conservation																																							.	.																													.	.
Alig confidence																																							.	.																													.	.
Template Conservation
Template Sequence		A	A	E	Y	A	V	V	L	K	T	L	S	N	P	F	W	V	D	M	K	K	G	I	E	D	E	A	K	T	L	G	V	S	V	D	I	F	A	S	P	S	E	G	D	F	Q	S	Q	L	Q	L	F	E	D	L	S	N	K	N	Y	K	G	I	A	F	A	P	L	S	S	V	N	L	V	M	P	V	A	R	A
Template Known Secondary structure										S		S	S	S																		T									S	S	T	T														T	S	S									S	S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		143	.	.	.	.	.	.	150	.	.	.	.	.									.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure															.	.	.	.	.	.	.	.																												.	.	.
Query SS confidence															.	.	.	.	.	.	.	.																												.	.	.
Query Sequence		Q	R	N	L	P	P	M	V	M	A	N	E	F	.	.	.	.	.	.	.	.	A	P	E	L	E	L	P	T	V	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	.	.	.	G	H	K	R	I	G	C	I	A	G	P	E	E	M	P	L	C	H	Y	R	L	Q	G	Y	V	Q	A	L	R
Query Conservation															.	.	.	.	.	.	.	.																												.	.	.
Alig confidence															.	.	.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		W	K	K	G	I	Y	L	V	N	L	D	E	K	I	D	M	D	N	L	K	K	A	G	G	N	V	E	A	F	V	T	T	D	N	V	A	V	G	A	K	G	A	S	F	I	I	D	K	L	G	A	E	G	G	E	V	A	I	I	E	G	K	A	G	N	A	S	G	E	A	R	R	N	G	A	T	E	A	F	K
Template Known Secondary structure				T	T							S	S										T	T				S																							G	G	G										S	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	C	G	I	M	V	D	P	Q	Y	I	A	R	G	D	F	T	F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	Q	P	P	T	A	V	F	C	H	S	D	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P	E	D	L	S	I	I	G	F	D	N	I	D	L	T	Q	F	C	D	P
Query Conservation
Alig confidence					.																																																						.	.
Template Conservation					.																																																						.	.
Template Sequence		K	A	S	.	Q	I	K	L	V	A	S	Q	P	A	D	W	D	R	I	K	A	L	D	V	A	T	N	V	L	Q	R	N	P	N	I	K	A	I	Y	C	A	N	D	T	M	A	M	G	V	A	Q	A	V	A	N	A	G	.	.	K	T	G	K	V	L	V	V	G	T	D	G	I	P	E	A	R	K	M	V	E
Template Known Secondary structure		T		T	.	T										T	T																	T	T							S	S														T	T	.	.		T	T	T	S						S
Template Predicted Secondary structure					.																																																						.	.
Template SS confidence
		161	.	.		.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.			.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		292				.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		P	.	.	.	L	T	T	I	A	Q	P	R	Y	E	I	G	R	E	A	M	L	L	L	L	D	Q	M	Q	G	Q	H	V	G	S	G	S	R	L	M	D	C	E	L	I	I	R	G	S	T	R	A
Query Conservation			.	.	.
Alig confidence			.	.	.
Template Conservation
Template Sequence		A	G	Q	M	T	A	T	V	A	Q	N	P	A	D	I	G	A	T	G	L	K	L	M	V	D	A	E	K	S	G	K	V	I	P	L	D	K	A	P	E	F	K	L	V	D	S	I	L	V	T	Q
Template Known Secondary structure			T	S	S																									T	S	S				T	T	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions