Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACN7
Confidence83.46%DateThu Jan 5 11:18:37 GMT 2012
Rank487Aligned Residues211
% Identity9%Templated1dp4a_
SCOP infoPeriplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6970.........80. ........90...... ...100...... ...110.........120........
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Query Sequence  TILVIVPDICDPF. . . FSEIIRGIEVTAANH. . . . . . . . GYLVLIGDCA. . . . . . . . HQNQQEKTFIDLIITKQIDGML.
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Template Sequence  TVAVVLPLTNTSYPWSWARVGPAVELALARVKARPDLLPGWTVRMVLGSSENAAGVCSDTAAPLAAVDLKWEHSPAVFLG
Template Known Secondary structure 
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   129130.........140.........150. ........160.........170.........180.........190.........200.
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Query Sequence  LLGSRLPFDASIEEQRNLPPMVM. . . . . . . ANEFAPELELPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHY
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Template Sequence  PGCVYSAAPVGRFTAHWRVPLLTAGAPALGIGVKDEYALTTRTGPSHVKLGDFVTALHRRLGWEHQALVLYADRLGDDRP
Template Known Secondary structure 

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GGGG
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   202.......210.........220.........230.........240.........250.........260.........270.........
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Query Sequence  RLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLLDLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIG
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Template Sequence  CFFIVEGLYMRVRERLNITVNHQEFVEGDPDHYPKLLRAVRRKGRVIYICSSPDAFRNLMLLALNAGLTGEDYVFFHL
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   164.....170.........180.........190.........200.........210.........220.........230.........240.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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