Job Description P0ACN7 Confidence 97.78% Date Thu Jan 5 11:18:37 GMT 2012 Rank 84 Aligned Residues 213 % Identity 12% Template c3t0nA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal; PDBTitle: crystal structure of twin-arginine translocation pathway signal from2 rhodopseudomonas palustris bisb5 Resolution 2.22 Å

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		64	.	.	.	.	.	70	.	.	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.		.	130	.	.
Predicted Secondary structure															.	.																						.	.	.	.	.	.	.																								.									.
Query SS confidence															.	.																						.	.	.	.	.	.	.																								.									.
Query Sequence		R	N	E	S	R	T	I	L	V	I	V	P	D	.	.	I	C	D	P	F	F	S	E	I	I	R	G	I	E	V	T	A	A	N	H	G	.	.	.	.	.	.	.	Y	L	V	L	I	G	D	C	A	H	Q	N	Q	Q	E	K	T	F	I	D	L	I	I	.	T	K	Q	I	D	G	M	L	.	L	L	G	S
Query Conservation															.	.																						.	.	.	.	.	.	.																								.									.
Alig confidence															.	.																						.	.	.	.	.	.	.																								.									.
Template Conservation
Template Sequence		A	E	D	T	F	K	V	G	L	I	V	P	X	T	G	G	Q	A	S	T	G	K	Q	I	D	N	A	I	K	L	Y	I	K	K	H	G	D	T	V	A	G	K	K	I	E	V	I	L	K	D	D	A	A	I	P	D	N	T	K	R	L	A	Q	E	L	I	V	N	D	K	V	N	V	I	A	G	F	G	I	T
Template Known Secondary structure			T	T										S	S	S	T	T																				S			T	T											T	T															T	S			S						S	S
Template Predicted Secondary structure
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.
Query SS confidence																									.	.	.	.	.
Query Sequence		R	L	P	F	D	A	S	I	E	E	Q	R	N	L	P	P	M	V	M	A	N	E	F	.	.	.	.	.	A	P	E	L	E	L	P	T	V	H	I	D	N	L	T	A	A	F	D	A	V	N	Y	L	Y	E	Q	G	H	K	R	I	G	C	I	A	G	P	E	E	M	P	L	C	H	Y	R	L	Q	G	Y	V
Query Conservation																									.	.	.	.	.
Alig confidence																									.	.	.	.	.																																					.	.
Template Conservation																																																																		.	.
Template Sequence		P	A	A	L	A	A	A	P	L	A	T	Q	A	K	V	P	E	I	V	X	A	A	G	T	S	I	I	T	E	R	S	P	Y	I	V	R	T	S	F	T	L	A	Q	S	S	I	I	I	G	D	W	A	A	K	N	G	I	K	K	V	A	T	L	T	.	.	S	D	Y	A	P	G	N	D	A	L	A	F	F	K
Template Known Secondary structure															T						S	S				G	G	G	G	G	G		T	T				S	S																	T	T									.	.		S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170			.	.	.	.	.	.	.	.	.	180	.	.	.	.
		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	A	L	R	R	C	G	I	M	V	D	P	Q	Y	I	A	R	G	D	F	T	F	E	A	G	S	K	A	M	Q	Q	L	L	D	L	P	Q	P	P	T	A	V	F	C	H	S	D	V	M	A	L	G	A	L	S	Q	A	K	R	Q	G	L	K	V	P	E	D	L	S	I	I	G	F	D	N
Query Conservation
Alig confidence																								.	.	.																																							.
Template Conservation																								.	.	.																																							.
Template Sequence		E	R	F	T	A	G	G	G	E	I	V	E	E	I	K	V	P	L	A	N	P	D	.	.	.	F	A	P	F	L	Q	R	X	K	D	A	K	P	D	A	X	F	V	F	V	P	A	G	Q	G	G	N	F	X	K	Q	F	A	E	R	G	L	D	.	K	S	G	I	K	V	I	G	P	G	D
Template Known Secondary structure							T	T											S	S	S			.	.	.											S			S								T	T												T	T	G	G	.	G	T	T							G	G
Template Predicted Secondary structure																								.	.	.																																							.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.				.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.		.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions